Hymenobacter sp. APR13: N008_06015
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Entry
N008_06015 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
hym
Hymenobacter sp. APR13
Pathway
hym00071
Fatty acid degradation
hym00362
Benzoate degradation
hym00650
Butanoate metabolism
hym01100
Metabolic pathways
hym01120
Microbial metabolism in diverse environments
hym01200
Carbon metabolism
hym01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
N008_06015
09103 Lipid metabolism
00071 Fatty acid degradation
N008_06015
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
N008_06015
Enzymes [BR:
hym01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
N008_06015
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Paralog
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GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
Pyr_redox_2
Pyr_redox
NAD_binding_2
ApbA
UDPG_MGDP_dh_N
2-Hacid_dh_C
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AII51536
LinkDB
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Position
complement(1403857..1406265)
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AA seq
802 aa
AA seq
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MNRTIKKVAVLGSGVMGSRIACHFANIGVQVLLLDIAPKELLPAEEAKGLKLDNPAVKNR
IVNASLQAAVAANPSPLYRKADAARIKTGNFDDNLKDITGCDWTIEVVVERLDIKKSLFE
RVEQYRKPGTLITSNTSGIPIHMMTEGRSDDFRKHFCGTHFFNPPRYLKLLEIIPTPETD
KSVVDFLMHYGDLYLGKTTVLAKDTPAFIANRVGVFAIMDVVQVMSELGLTVEEVDKLTG
PVIGHAKSATFRTSDVVGLDTMINVANGLAQNLPNDEAKHVFQLPDFIKKMAENKWLGDK
TAQGFYKKVKGAGGKSEIQALDLNTLEYKPSQKVKFATLEATKPIEKLADRFKVLAAGKD
KAGDFYRKTFAGLFAYVSNRIPEITDSLYKIDDALRAGFGWDLGPFETWDALGVQKGLEL
AKAEGKTVAPWIEEMVAAGHTAFYKVSEAGVKQFYDIESKSYQAIPGMENFIILDNMRAT
GKVLWKNAGASVLDMGDGILNVEFHSKMNALGSDVIQGLLKGVELAEKDFRGLVVGNDAP
NFSAGANLGLVYMFALDQEYDELNLMIAQFQQAMMRMRYSSIPVVGAPHGLALGGGCELN
LHCDRVVAAAETYMGLVEFGVGLIPGGGGTKEMTLRTALKYEEGEPEYNLLRNAFMTVST
AKVSTSAHEAFDLGFLRRGDEVVVNSNRVLAQAKAAAIELAEDGYTQPLQKTNIKVQGKG
ALGMFLTGVHAMKEGRYISDHDVKIANKLAYIMCGGDLSSPTEVSEQYLLDLEREAFLSL
TGERKTLERIQSILTTGKPLRN
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtaccatcaaaaaagtagccgtattgggctccggggtgatgggctcgcgcatt
gcgtgccacttcgccaacatcggtgtgcaggtactgctgctcgacattgcgcccaaggag
ctgctgcccgccgaggaggccaaaggcctaaagctggacaacccggccgtgaagaaccgc
atcgtgaatgcctcgttgcaggcagctgtagcggccaatccgtcgccgctgtaccgcaag
gccgacgccgcgcgcatcaagaccggcaactttgacgataacctcaaggatattaccggc
tgcgactggacgattgaggtggtagtggaacgtctcgacatcaaaaagagcctgtttgag
cgcgtagagcagtaccgcaagcctggtacgcttatcacctcgaacacctcgggcattccg
attcacatgatgacggaaggtcgttccgacgacttccgcaagcacttctgcggcacacac
ttcttcaacccgccgcgctacctgaagctgctcgaaatcatcccgacgccggaaaccgac
aagtcggtggtggatttcctgatgcactacggcgacctgtacctgggcaaaaccacggtg
ctagccaaggataccccggccttcattgccaaccgcgtgggcgttttcgccatcatggac
gtggtgcaggtgatgagcgagctgggcctgacggtggaagaagtggacaagctgaccggg
ccggttatcggccacgccaagtcggccacgttccgcacctccgacgtggtaggtctggat
acgatgatcaacgtggccaacggcctcgcccagaacctgcccaacgacgaagccaagcac
gtgtttcagctgcccgacttcatcaagaagatggccgagaacaagtggctaggcgacaaa
accgcccagggcttctacaaaaaagtgaagggcgccggcggcaagtcggaaattcaggcc
ctcgacctgaacacgctggagtacaagcccagccagaaggtgaagtttgccaccctggaa
gccaccaagccgattgaaaagctggcggaccgcttcaaggtgctggccgccggcaaagac
aaagccggggacttctaccgcaagaccttcgcgggcctgtttgcctacgtgagcaaccgg
attccggaaattaccgactcgctctacaagattgacgacgccctgcgcgctggcttcggc
tgggacctgggccccttcgaaacctgggatgccctgggcgtgcagaagggcctggagctg
gccaaggccgaaggcaaaaccgtagcgccgtggatagaggagatggtagccgccggccac
actgccttctacaaagtgagcgaagcaggcgtgaagcagttctacgacatcgagtcgaag
agctaccaggccattccgggcatggagaacttcatcattctggataacatgcgcgccacg
ggcaaagtgctgtggaaaaacgccggggcctcggtgctcgatatgggcgacggtatcctg
aacgtggaattccactcgaaaatgaatgcgctgggttccgacgtcatccaaggcctgctg
aaaggcgtggagctggccgaaaaggacttccgcggcctcgtggtgggcaacgacgcgccg
aatttctcggccggggccaatctgggcctcgtgtacatgttcgcgctggaccaagagtac
gacgagctgaacctgatgattgcccagttccagcaggccatgatgcggatgcgctacagc
agcattccggtggtgggcgcaccccacggcctggccctgggcggcggctgcgagctgaac
ctgcactgcgaccgggtggttgcggcggccgaaacctacatgggcctcgtggaattcggc
gtgggcctgattccgggcggcggcggcaccaaagaaatgacgttgcgcaccgccctcaag
tacgaggaaggtgagccggagtacaacctgctgcgcaacgccttcatgacggtaagcacc
gccaaggtatccacctcggcccatgaagccttcgatttgggcttcctgcgccgcggcgat
gaagtggtggtgaattccaaccgcgtactggcccaggccaaagccgccgccattgagctg
gccgaggacggctacacccagccgctgcagaaaaccaacatcaaggtgcagggcaaaggc
gccctgggcatgttcctgaccggcgtacacgccatgaaggaaggccgctacatctccgac
cacgacgtgaaaattgccaacaagctggcctacatcatgtgcggcggcgacctgagcagc
cccaccgaagtatcggagcagtacctgctggacctggagcgcgaagccttcctcagcctc
accggcgagcggaaaacgctggagcggattcagagcatcctgaccaccggcaaacccttg
agaaactag
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