Hymenobacter sp. APR13: N008_06850
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Entry
N008_06850 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hym
Hymenobacter sp. APR13
Pathway
hym03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
N008_06850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hym03019
]
N008_06850
03009 Ribosome biogenesis [BR:
hym03009
]
N008_06850
Messenger RNA biogenesis [BR:
hym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N008_06850
Ribosome biogenesis [BR:
hym03009
]
Eukaryotic type
Pre-60S particles
RNases
N008_06850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AII51702
LinkDB
All DBs
Position
complement(1607724..1608323)
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AA seq
199 aa
AA seq
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MRYISLDLETTGGNPERHQILELAAVVEDTRHLLPLAELPAFRRVVRYPELTGTAGALAL
NAGLLQELARKEPNPELCTPDELLPQLREFLLAQGFKTDKKDCVAVAMAGKNIASFDLGF
LRQLPGYGMLVRAEPAMLDPAAFYLNWHKDTRLPTMQICKARAGFSDDTVAHQALADALD
VVQLLRPFYELPVYKAVNQ
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacatctccctcgaccttgaaaccaccggcggcaaccctgagcggcaccagatt
ttggagctggccgccgtggtggaagacacccggcacctgctgccgctagctgagctgccg
gcgtttcgccgggtggtgcggtatccggagctaaccgggacggccggggccttggctcta
aatgctggtttactacaggagttggcccgcaaagaacccaaccccgagttgtgcaccccc
gacgagttgctgccccaactgcgggagtttctgctggcccagggattcaaaactgataaa
aaagactgcgtagcagtagcgatggccggcaagaacattgcatccttcgacttaggcttc
ctgcgtcagttaccaggttacggcatgttggtacgcgccgaacccgccatgctcgatccg
gctgccttctacctcaactggcacaaagacacccgcctgcccaccatgcagatatgcaag
gcccgcgccggtttctcagacgacaccgtggcccaccaagctctggctgacgccttggac
gtagtgcagcttctgcgcccattctacgagttgccggtatacaaagcagtaaatcagtag
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