Hymenobacter sp. APR13: N008_07780
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Entry
N008_07780 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hym
Hymenobacter sp. APR13
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hym03016
]
N008_07780
Enzymes [BR:
hym01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
N008_07780
Transfer RNA biogenesis [BR:
hym03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
N008_07780
Prokaryotic type
N008_07780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF402
Motif
Other DBs
NCBI-ProteinID:
AII51879
LinkDB
All DBs
Position
complement(1836977..1837768)
Genome browser
AA seq
263 aa
AA seq
DB search
MRYFLHLAYDGTRYHGWQVQPNTLTVQQELDRCLSQVLRQPVFCLGSGRTDTGVHASHQV
AHFEAELPETLDIKTLLYRLNRALPPDIAAYALHPVPPQAHARFSADARTYEYYVRQVPD
PFSVGRALYLDLDLDVAAMNEAAAHLLGSRDFTAFSKVKGGENHYVCVVYEAGWHPMPGG
LVFRIRANRFVRGMVRLVVGTLLSVGRGKIAPAQFQQILWAQSRVDASGAAPAQGLYLSR
VEYTPDVVPADLVPPGLPYFVGR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgcgctacttccttcatctggcctacgacggcacccgctaccacggctggcaggtgcag
cccaacacgctcacggtgcagcaggagctggaccgctgcctgtcgcaggtgctgcggcag
ccggtgttctgcctgggcagcggccgcaccgacaccggcgtgcacgctagccaccaggta
gcgcacttcgaggccgagctgccagaaacgctggacatcaaaaccctgctctaccgcctc
aaccgcgccctgccgcccgacattgccgcctacgccctgcatccggtgccgccgcaggcc
cacgcgcgcttctcggccgatgcccgcacctacgagtactacgtgcgccaagtgcccgac
ccgttcagcgtgggccgcgccctctatcttgaccttgacctcgacgtggccgccatgaac
gaagccgccgcccacctgctcggctcgcgcgacttcacggcgttttccaaggtgaaaggc
ggcgaaaaccactacgtctgcgtggtgtacgaggccggctggcacccgatgccgggcgga
ctggtgttccgcatccgggccaaccgcttcgtgcggggcatggtgcggctggtagtgggc
acgctgctgagcgtgggccgcggcaaaattgcgcccgcccagtttcagcagattctgtgg
gctcagagccgcgtagacgccagcggcgccgccccggcccagggcctctatctgagccgc
gtggaatacacgcccgatgtggtgcccgccgacctggtgccgcccggtttgccgtacttt
gtaggccggtag
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