Hymenobacter sp. APR13: N008_08195
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Entry
N008_08195 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
hym
Hymenobacter sp. APR13
Pathway
hym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N008_08195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hym02000
]
N008_08195
Transporters [BR:
hym02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
N008_08195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_16
AAA_29
nSTAND1
AAA_5
AAA
NACHT
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AII51958
UniProt:
A0A076HS39
LinkDB
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Position
complement(1921368..1923401)
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AA seq
677 aa
AA seq
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MSQPILSVRNLTIDFNSHRGNTRAVQDISFDLHRGETLAIVGESGSGKSVTSLALMGLIP
LPPGRIVSGEARFQSEALGEVDLLQLTDKQLQQVRGNDIGMIFQEPMTSLNPVYTCGSQV
VEALRLHTPLSEKEAEARTVELFTMAQLPRPEKIFTSYPHEISGGQKQRVMIAMAMACNP
AILIADEPTTALDVTVQARMLRLIDDLRRQHNTAVIFITHDLGVVAEIADRILVMYRGRV
VEQGPVLDIFTNPQHPYTKGLLACRPKLSVGRKKLPVVADFMRETAEGGFISTETDFTQV
VDGLAPEVPASTSHNDGETAKTFPVEHRVSRPETPEFGLETAPSLESGQPLLTSNGATSG
AANSPEGFVVPLPLNDAATPATPAAASFNDSGTTRPSATHGTTAPLLQVENLNVHFPIRK
GFFNRKPEFVRAVDGVSFEVYPGETVGLVGESGCGKTTLGRALLRLVEPTSGSILFEGED
LARLPAEQLRRRRREFQMVFQDPYAALNPMMTVGEAILEPMRVHGVGGTRQEQKARVLEL
LRTVGLTEAQYQRYPHEFSGGQRQRICIARALALQPKCIICDESVSALDVSVQAQVLNLL
NDLKREFGITYLFITHDLSVARFMSDRLLVMRQGQIVESGPAADIYANPQHEYTKQLLAA
IPKDTPADIRAAVASRA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcccattctttccgttcgcaacctcaccatcgacttcaacagccaccgtggc
aacacgcgggccgtgcaggacatttcctttgacctgcatcggggcgagacgcttgccatc
gtgggcgagtcgggctcgggcaagtcggtgacgtcgctggcgctgatggggctgattccg
ctgccgcccggccggattgtgagcggcgaagcgcggtttcagagcgaggcgctaggggag
gtggacttgttgcagctcacggataagcagctgcagcaagtacgcggaaacgacatcgga
atgatttttcaggagccgatgacctcgctgaaccccgtgtacacctgcggcagccaagtg
gtggaggccctgcgcctgcacaccccgctcagcgagaaggaagccgaggcccgcaccgtg
gagctgttcacgatggcccagctgccgcgacccgagaaaatattcaccagctacccccac
gaaatcagcggcggccagaagcagcgcgtgatgattgccatggccatggcctgcaacccc
gccatcctcattgccgacgagcccaccaccgccctcgacgtaacggtgcaggcccgcatg
ctccgcctcatcgatgacctgcgccgccagcacaacactgccgtcatcttcatcacccac
gacttgggcgtggtggccgaaattgccgaccggattctggtgatgtaccgcggccgcgtg
gtagagcagggccccgtgctcgacatattcaccaatccgcagcacccctacaccaaaggc
ctgctggcctgccgcccaaaactttccgtcggacgcaaaaaacttcctgtagtggccgat
ttcatgcgtgaaacggccgaaggaggctttatcagcactgaaactgacttcacgcaagta
gttgacggtcttgcccctgaagtccccgcttccacctctcacaacgacggtgaaaccgcc
aaaacgttccccgtggaacatcgtgtttcacgccctgaaaccccggaatttggcttggaa
acggccccaagcctggaatccggccaacccctgctgaccagcaacggcgccaccagtggt
gctgcgaattccccggaggggttcgtagtaccactaccgttgaacgacgccgccacgccc
gccacgcccgctgccgcctcgttcaacgatagtggtaccacgaggccctcggcaactcat
ggcaccactgcccccttgctgcaggtcgagaatctgaacgtgcacttcccgattcgcaag
ggattcttcaaccgcaagcccgagtttgtgcgggccgtagatggcgtgagcttcgaggtg
tatccgggcgaaactgtcgggctggtgggggagtcgggctgcggcaagaccacgctgggc
cgggcgctgctgcggctggtggagccaacctcgggcagcatcctgtttgagggcgaagac
ctggcccgcctgccggccgagcagctgcgccgccgccgccgcgagtttcagatggtcttc
caggacccctacgccgccctcaacccgatgatgaccgtgggcgaggccatcctggagccc
atgcgcgtccatggcgtgggcggcacccgccaggagcagaaggcccgcgtgctggagctg
ctgcgcaccgtcggcctcaccgaagcccagtaccagcgctacccgcacgagttcagcggc
gggcagcgccagcgcatctgcattgcccgcgctctggccctgcagcccaagtgcatcatc
tgcgacgagtccgtgtcggccctcgacgtgtcggtgcaggcgcaggtgctcaacctgctc
aacgacctcaagcgcgaattcggcatcacctacctgttcatcacccacgacctctcggtg
gcccgcttcatgtccgataggctgctggtgatgcgccagggccagatcgtggaaagcggc
cccgccgccgacatctacgccaacccccagcacgagtacaccaagcagttgctggccgcc
atccccaaagacacccccgccgacatccgcgccgccgtagccagccgggcgtag
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