Hymenobacter sp. APR13: N008_09270
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Entry
N008_09270 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
hym
Hymenobacter sp. APR13
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hym02000
]
N008_09270
Transporters [BR:
hym02000
]
Other transporters
Pores ion channels [TC:
1
]
N008_09270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
Por_Secre_tail
SdrD_B
TcfC
bMG3
Motif
Other DBs
NCBI-ProteinID:
AII52164
UniProt:
A0A076HX13
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All DBs
Position
2178358..2182572
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AA seq
1404 aa
AA seq
DB search
MKQGTTFDVVKETTANGGDKWTRYAVSFTTNSTQTALALALRNPRSTTGTGNALAISSIS
FRTDNPGAVNSRYSCDGQFYQIRQVVTTTAPITNSTRLFDVDRTTGNAYVTNEKKDLGAT
INGLGYRPGDGLQYALTYVSNEVASNTAGADRINEYTDPMELYVIDKNGDIKSLGIVGNL
PGDQWAGGVIDRAGNYYVVSQRFDTPRFYRIDLNAPTLTATQITFTGAPAAGTGFALYDI
AFNPRDNNFYGVSFLNEAYKLVVNNTTNTAAVTRLTNATAVTFNQTQAMGTCFFDIAGTF
YAYRNGTAGTAGSSNFYIISTTDGSATNLSAVDPAINSDGASCVTPDQSVDVVKEVVSVT
PSGTPNQFNVAFSIKVRNNGSITDPNVQVSDLLWSGNTTANAATTFSGANNVTISGLTVT
NTAGATLAANTGATGFNGQSGRAGLLTGNQQLAAGQGAIITFTAQVTFPSAAAVPTAGQN
NTAYGTSTVASFIGYTLQGSTLVPPPDLLAQDASTNSAALPETPNADAASPSPIYYQTAI
LGNVFEDANYGGGAGRSQTASNGEGVSGARVELYSSAGSFIGFANADAAGNYSFVNGLNG
ITLTASTVYRVRVVNSTVVSNRPGSIAGLLPVQTYLNGNVNRVGGEEPNLIDEVANTGAQ
TLVQVEAVSAAGTIETLTPLTGTGSVTTPASGPLVGVDFGFNFSTVVNTNNSGQGSLRQF
IVNSNTLTNANLDQAAFNGTAAATTTAIDPAAGVEYAIFMLNDGRLTGAPAGLRDAMTAP
AGYNITSKAFTFNSATLPTITDSNTAIDGKLQTILTGEGTIPTANNTAGEIILDFVGATR
GGLLITGANTRIASLNVTNAGVAVGSRALNTTGAVQSDGAAIVFTGAGTIGSVVNNITGQ
NNTIATVLLEGGATGVTISNSVMRTGRATAASGTTIAYDGAGILLSNASGNTINNNNISA
NNGFGIELAGGSNGNTITGNQIGSNGAGTATASDAGISITLGNNNLIGNNTITGNSGDGI
VAANSTSGNRFTQNSFSANGDLGIDLVTTGSASVTGDGQNLNDNTDVDTGANGILNFPVI
TQLFKDANSLLMLGYAPANAVVEFFVADVAAAAYGEGLTYLTTRIEGNATDDTDNNVGTY
SFSGFPGEINQGSERNARRFAFTIPLSSLTPAQLTALNTSGARLTATATIINTVNGLSVG
NTSEFSGNVAVTATPLPVELKAFEVAASNANALLTWSTASEQNNDHFVVERSVDGGSFER
IGQVQGRGTTSQMTNYSFTDINIGTKRAGVVYYRLQQVDTDGTASYSPVRTVNFAAGLTA
GVATVGVYPNPATSQDRTITLALTTLPTGTYKVTVLDATGRVVRTQAVQGGQDQTLQVQQ
LPAGMYLVQVRGNSLNLTQRFSKQ
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcagggaaccacctttgacgtggtgaaggagactactgccaatggcggcgataag
tggacgcgttacgccgtctcatttacgacgaacagtacacaaactgctttggctctagcc
ttacgcaaccctcgatccacgacgggtaccggcaacgcgttggctatcagtagcatttca
tttcggactgataatcccggcgccgtgaattcacgctatagctgcgacgggcagttctac
cagattcggcaagtcgttactactacagcaccaatcaccaactccactcgccttttcgac
gtggaccgcacaactggtaatgcttatgttacgaacgaaaagaaggacttaggagctacc
ataaacggtctgggttaccgtccgggggatggcctgcagtatgcgctgacctatgtttca
aacgaagttgcgtctaacacggccggtgcagatcgtatcaatgaatatacagatccaatg
gaactgtatgtcattgacaagaatggtgacatcaagtcgcttggcattgtaggtaattta
cccggtgaccagtgggcgggaggcgttattgatcgggcaggcaactattatgtggtgagc
cagcggtttgatacaccgcgtttctatcgaatagatttgaatgcgccgacactaacggct
acacaaataacattcacgggggctcccgcagcaggtactggttttgctctctacgacata
gcctttaacccgcgggataacaacttctatggagtgagcttcttgaacgaagcatataag
cttgtagtcaacaatacgacgaatacggcagcggtaactcgcctcaccaacgcaacggca
gtgacgttcaatcagacccaagcaatgggtacctgcttcttcgacattgctggtacattc
tatgcgtatcgtaatggcacagcaggcaccgccggttcttccaacttttacattatcagc
actacggatggttcagcgactaacctgtcggcagtagacccagccataaacagcgatgga
gccagttgcgtgacgcctgaccagagtgtggatgtagtgaaggaagtagtgagcgtgacg
ccgtcgggaacacccaaccagtttaacgttgcattcagcattaaggtccgcaacaacggt
tccatcactgacccaaacgtgcaggtttctgacctgctgtggagcggtaataccacagct
aatgctgctactacgttttccggtgctaacaacgtcacgatttcgggtctgacagtaacc
aatacggctggtgccacactagccgccaacacgggagccactggttttaacggacaatcg
ggccgggctggcctgctaactggtaaccagcaattagccgctgggcagggtgccattata
acctttacagctcaagtgactttcccttcggctgcggcagtacctactgcaggacagaat
aacacggcgtatggcacgagcacagtggcttccttcattggatatacgctgcagggtagc
accttggtccctccgcccgacttgctggcccaagacgcctctaccaacagcgccgcccta
ccggagacgcccaacgccgatgcggcgtctccttcacctatctattatcagacggctatc
ctaggcaatgtgttcgaggatgccaactacggcggtggcgccggacgctcgcagaccgcc
agcaatggtgaaggcgtaagcggcgcaagggttgagttgtattctagtgcaggatccttt
atcgggttcgcgaatgctgatgcggctggcaattacagctttgtgaacggcttgaatggt
atcacgctcacggctagtactgtatatcgggtacgggtagtaaactccacggtagtaagc
aaccgccccggtagcatagcgggtctgttgcccgtacaaacgtatctgaacggcaatgtg
aaccgggtaggtggcgaggagcctaacctcatagatgaggtagccaacacaggcgcacaa
acgttagtgcaagttgaggcagtaagtgctgcgggtactatcgaaaccctgactcctctc
accggcaccggatctgtcactactccggcttccggccctttggtgggggtagactttggc
ttcaacttcagcacagtagtaaacaccaataactccggccaagggtctttgcggcagttc
attgttaacagcaataccttgactaatgccaacttggatcaggcagcctttaatggcact
gcagcagcaacaactacggccatcgatccggcggcgggcgttgaatatgccatctttatg
ctcaacgatggacgcctaaccggagcgccggcaggtctgcgtgacgccatgactgcacct
gcaggctacaacattacgtccaaggccttcacgttcaactctgctacgctgccaaccatt
accgatagcaacacggctattgatggtaagctgcagactattctaacgggtgaaggcaca
ataccgactgctaacaacaccgccggtgaaatcatccttgactttgtaggggcaacccga
ggtggtctgcttatcacgggcgctaacacacgcattgcttcgctcaacgtaactaacgct
ggtgtagctgttggaagcagggcattgaatactaccggtgccgtccaatccgatggtgca
gctatcgtcttcacgggcgcaggcactattggctcggtggtaaacaatattacgggtcag
aacaacaccattgctacggttctgctggaaggaggcgccacgggtgtgaccatcagcaac
agtgtgatgcgtacaggccgtgctacggccgcctccggcactactattgcctatgatggg
gcaggtattttgctctccaatgcttccggtaacaccattaacaacaacaatatcagcgct
aacaatgggtttggtattgagttggctggggggagcaacgggaatactatcactggaaac
cagattggctcaaatggcgcaggtacagccactgctagtgacgctggcattagcatcacg
ttgggtaacaacaacttgattggtaacaacacaatcactggtaactccggcgacggtatt
gtagctgccaacagcacttccggcaaccgtttcacccaaaacagcttctccgccaacggt
gacttgggtattgacctagtgacgacgggtagcgctagcgtaaccggcgacggccagaac
ctgaatgataacactgatgtggacaccggcgccaatggaatcctcaactttccggttatc
actcagcttttcaaagacgctaacagcctgcttatgctagggtatgctcccgccaatgct
gtagtagagttctttgtggctgatgtagctgctgctgcctacggtgagggactgacttac
ctcacaactcgcattgaaggcaatgctaccgacgataccgataataatgttggcacgtat
tccttctctggcttccctggtgaaatcaatcaaggcagcgagcgaaatgcccgtcgtttt
gccttcactattccactatcgagcctgacgccagctcaactcacggctcttaatacaagt
ggcgcccgccttacggcaacagcgaccattatcaatacagtaaatggattgtctgtaggt
aacacatcagagttttccggcaatgttgccgtgactgctaccccactgcccgtcgagctg
aaagccttcgaggtagcggccagcaatgccaacgccttgctgacctggagcacggcttca
gagcagaataacgaccatttcgttgtggagcgcagcgttgatggcggcagcttcgagcgg
atcgggcaggtgcagggccgcggcactaccagccagatgaccaactacagcttcaccgat
atcaacatcgggaccaagcgcgccggtgtggtgtactaccgtttgcagcaggtcgacaca
gatggcacggccagctacagccctgtacgtacggtcaacttcgcggcaggcctgacggct
ggcgtggcgacagtaggggtgtaccccaacccagccaccagtcaggaccgtaccatcacg
ctggctctgacgacactgcctactggcacgtacaaggtaactgtgctggatgcaacgggc
cgggtggtgcgtacgcaagccgtgcagggcgggcaggaccagacgctgcaggtgcagcaa
ctgccggctggcatgtacttggtgcaggtgcgcggtaattccctcaacctgactcaacgc
ttcagcaagcagtaa
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