Hymenobacter sp. APR13: N008_11160
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Entry
N008_11160 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K16092
vitamin B12 transporter
Organism
hym
Hymenobacter sp. APR13
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hym02000
]
N008_11160
Transporters [BR:
hym02000
]
Other transporters
Pores ion channels [TC:
1
]
N008_11160
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AII52531
LinkDB
All DBs
Position
complement(2627635..2629620)
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AA seq
661 aa
AA seq
DB search
MSENLVQLINLPFAARLRPVPFLLLGAACWATPATAQQTPYALDSVQMLPAVRVQGLPAT
RFATGTRRTTLDTLALRQAGAGTLADALSLRTPLYLKNYGPGQLASITLRGTSARHTAVL
WQGFNINLPSLGEADFALLPVSGATQVAVQHGPAGATYGTGAIGGTVLLTSPVRWGQGLQ
SRVQLDGGSFGLAAGSGEATFSNQKLSIRTAASYRTAQNDFPYREPVGRENGRLVYGPTQ
RQQNAALRQWSVAQDATLRVGEQGELTAAVWLTDADRQIQAALGSVNRHARERDQSRRLL
AGYRHVSSRHETSVRAAWFEDIINYQDDGVRSDSRVQTSQAQAEHTFRFAPTLSLRLGGE
AQHFVAHVDGYEAPTVTENRFSSFGLLHYDPLPRLQLSLNVRQAFISGRRPPLTPTAGAE
WLAWQRGTQQLSVKASASRSYRAPTLNERFWYPTGKPDLRPETSLGYEAGLRHEVRPTPT
LLLQTELTAFRQRVDDWVQWLPTDLGYAPNNLRQVLAQGLEASSELSWKPGRYTLAARAA
YAYTSSRKVRGYALDEDPVGQQLAYVPLHTAAFSTDHSWRGWLLTSALTFTGFRYTTASG
TDFLPSYLLLNAQLGHEFRVGRARLTPLVQGFNLGNLRYQSYQSRAMPGRSWVASLRVAW
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgaaaatttggttcagctaatcaaccttccttttgcggcacggctccggccagtg
ccctttctgctgcttggcgcagcctgctgggccacgcccgccacggcccagcagacaccg
tacgccctcgactcggtgcagatgctgccggcggtgcgcgtgcaaggcctgccggccacg
cgctttgctaccggcacccgccgcaccaccctcgacacgctggcgctccggcaggccgga
gccggcactttggccgatgcgctgtcgttgcgcacgccgctttacctgaaaaactacggc
ccgggccaactggccagcatcacgctgcgcggcacttcggcgcggcatacggccgtgctg
tggcagggcttcaacatcaacctgccttccttgggcgaagccgactttgcgctgctgccg
gtgagcggtgccacgcaggtggcggtgcagcacgggccggccggcgccacctatggcacc
ggcgccattggcggcacagtgctactgacttcgccggtgcgctgggggcaggggctgcag
agccgcgtgcagctggatggcggcagcttcgggctggccgccggctcgggcgaggctacg
ttcagcaaccagaaactttccatccggacggccgcctcttaccgcaccgcccagaacgac
ttcccgtaccgcgagccggtgggccgcgaaaacggccggctggtgtacggcccgacgcag
cgccagcaaaacgccgcgctgcggcagtggagtgtggcccaggatgccacgctgcgggta
ggcgagcagggagaactcacggccgccgtctggctcacggatgccgaccgccagattcag
gccgcgctgggctcggtgaaccgccacgcccgggagcgggaccagagccgccgcctgctg
gctggctaccgccacgtgagcagccgccacgaaacgagcgtgcgcgccgcctggtttgag
gacatcatcaactaccaggacgacggcgtgcgcagtgattcgcgggtgcagaccagccag
gcgcaggccgagcacacgttccgctttgcgcccacgctcagtttgcggctgggaggcgaa
gcacagcatttcgtggcccacgtggatggctacgaggcgcctaccgtgaccgaaaaccgg
ttcagcagcttcgggctgctgcactacgacccgctgccgcgcctgcagctcagtttgaac
gtgcggcaggccttcatcagcggccggcggcccccgctcacgcccacagccggcgccgaa
tggctggcctggcagcgcggtacccagcaactcagcgtgaaagccagcgcctcgcgcagc
taccgcgcccccaccctcaacgagcggttctggtaccccaccggcaagcccgacctgcgc
cccgaaaccagcctgggctacgaggccggcctgcgccacgaggtgcgccccactcccacc
ctgctgctccagaccgagctaaccgccttccggcagcgcgtagacgactgggtgcaatgg
ctgcccaccgacttaggctacgcgcccaacaacctgcggcaggtactggcccaaggcctc
gaagccagcagtgagctgagctggaagcccggccgctacaccctggccgcccgcgccgcc
tacgcctacaccagctcccgcaaagtgcgcggctatgcgctcgacgaagacccggtgggc
cagcagctggcctacgtgccgctgcacaccgccgccttcagcaccgaccacagctggcgc
ggctggctgctgaccagcgccctcaccttcacgggcttccgctacaccaccgcctccggc
accgatttcctgccctcctacctgctgctcaatgcccagctgggccacgagtttcgggtg
gggcgggcccggctgacgccgctggtgcagggcttcaacctcggcaacctccgctaccag
agctaccagagccgcgccatgcccggccgctcgtgggtggccagcctgcgcgtggcatgg
cgctga
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