Hymenobacter sp. APR13: N008_12100
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Entry
N008_12100 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K12257
SecD/SecF fusion protein
Organism
hym
Hymenobacter sp. APR13
Pathway
hym02024
Quorum sensing
hym03060
Protein export
hym03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
N008_12100
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
N008_12100
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N008_12100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hym02044
]
N008_12100
Secretion system [BR:
hym02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
N008_12100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
UvrA_DNA-bind
CIS_TMP
Motif
Other DBs
NCBI-ProteinID:
AII52713
UniProt:
A0A076HUC9
LinkDB
All DBs
Position
complement(2820586..2823606)
Genome browser
AA seq
1006 aa
AA seq
DB search
MRNKGLIIALTIIVSALCIYFLTFTFISRRVQNDAVVYATKGGQVDQKLRQRYLDSVWRA
PVTSLLGVDYTYRDVRSSELGLGLDLKGGMHVTLEVSPVEIVRAMSGNSKDPKFNQAMEQ
AQEAQKANPSTPFTTLFAQAYQTAAPGQNLARIFANTTNKSRGIDINSTNEKVIGAINKE
VEEAIDRSFNILRTRIDKFGTSQPSIQRVKGTGRIQVELPGVDNPDRVRKLLQGQAKLEF
WEVWRQDEFGPYLQQLDQALIAKEKTATTAKPATVAAATDTATAAATGDSTSLASQLAKK
NAATAAKTDTAATAQQGSVLARLFTMPVPGQLGVNVQDTARMNTILRSDEARAILPPNLT
FLWSVKPETIEGKEYLKLNAIRKQPGTEAPLGGEVVADARQDYDQGGRPEVSMAMNPSGA
KKWQKLTGANIGRQVGIVLDDYVYSDPVVQSEIAGGNTSISGNFSIEEAQDLSNVLKAGK
LPAPTRIVEEAVVGPSLGQEAINQGLYSSLAGLIIIMAFMALYYGRAGLVADAALLFNGF
LILGVLAQFSFALTLPGIAGLILVFASSVDANVLIFERIREELDHGLSLHDAINKGYSRA
FSAIFDSNVTTLIIALILFIFGTGPVQNFAVTLLIGIFTSFLSAVFISRLIIEWLVKGKE
KSSMTFSTFLSRKLFKGVNFDIVGKRKWAYAFSTIVIVVGFVLMAIQGGPNLGVDFRGGR
AYVVDFNKDMDASKVHDALVERAFQGAGTEVKTFGAPNRLRITTGYLADDESVVADKKVE
AAMVSELTKDFAADAPVIKSTSKVGATIADDIKRTSVLSLGLTLLGIFIYVLFRFEKWQY
SMAAVVALFHDALLVIACYPIARLFGLNYEMDQIFVAAVLTVIGFSMNDTVVIYDRIREY
LRENPKLTFAQVANPALNSTFSRTMITFTTVFLVVAVLYIFGGETLRSFSFAMLVGMIFG
TYSSLFIATPIILDTYGRKEARERGTDMSTHIGDGTDAPKLSTAQV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaataaaggactcatcattgcgctgaccatcattgtgtcggcgctgtgtatctac
tttctgaccttcacgttcatttcgcggcgggtgcagaacgacgccgtggtgtatgccacc
aaaggcggccaggttgaccagaaactgcgccagcgctacctcgactcggtgtggcgcgcg
cccgtaaccagcctgctcggcgttgactatacctaccgcgacgtgcgctcgtcggagctg
ggcctcggccttgacctgaaaggcggcatgcacgtgacgctggaagtgtcgccggtggag
attgtgcgcgccatgagcggcaactccaaagaccccaagttcaaccaggccatggagcag
gcgcaggaagcccagaaggccaacccttcgacgccgttcacgaccctcttcgcgcaggcg
taccagacggccgctcccggccagaacctggcccgcatcttcgctaacaccaccaacaag
agccgcggcatcgacatcaactcgactaacgagaaggtaatcggtgccatcaacaaggaa
gtggaagaagccattgaccgctcgttcaacatcctgcggacccgtatcgacaagttcggc
accagccagcccagcattcagcgcgtgaaaggcacgggccgcattcaggtggagctgccc
ggcgtggataaccccgaccgtgtgcgcaaactgctgcaaggccaggccaagctggagttc
tgggaagtatggcgccaggatgagttcggcccctacctgcagcaactcgaccaggctctg
attgccaaagagaaaaccgctaccaccgccaagcccgccaccgtagccgccgccaccgat
actgctacggccgccgccaccggcgactcgacctcgctggccagccagctggccaagaaa
aacgccgctacggccgctaagaccgataccgccgccacggcgcagcagggttcggtactg
gcccgcctgttcacgatgccggtgcccggccaactgggcgtaaacgtgcaggacacggcc
cgcatgaacaccatcctgcgttccgacgaagcccgcgccattctgccgcctaacctgacg
ttcctgtggagcgtgaagccggagaccatcgaaggcaaggaatacctgaagctgaacgcc
atccgcaagcagcccggcacagaggctccgctgggtggtgaagtggtggctgatgcccgc
caggactacgaccagggcggccgccccgaagtgagcatggccatgaacccctcgggcgcc
aagaaatggcagaaactgaccggcgccaacatcggccgtcaggtgggtatcgtgctcgac
gactacgtgtactcggacccagtggtgcagtcggaaattgccggtggcaacaccagcatt
tcgggcaacttctccatcgaagaagcccaggacctttccaacgtactgaaagctggtaag
ctgcccgccccgacgcgcatcgtggaagaagccgtagtaggtccgtcgctgggccaggag
gctatcaaccagggtctttactcgtcgctggccggtctgatcatcatcatggccttcatg
gcactgtactacggccgcgccggtctggtggccgatgctgccctgctgttcaacggcttc
ctgattctgggcgtactggcccagttctccttcgcccttacgctgcccggcattgccggt
ctgatcctggtgtttgcctcgtcggtggatgccaacgtactgatcttcgaacggatccgg
gaagagttggaccacggcctgagcctgcacgacgccatcaacaaaggttactcgcgcgct
ttctcggccattttcgactccaacgttactacgctcatcatcgccctgattctgttcatc
ttcggtacgggtccggtgcagaacttcgccgtaacgctgctcatcggtattttcacctcg
ttcctgtcggccgtgttcatctcgcgcctcatcatcgagtggctggtgaaaggcaaggag
aagagcagcatgaccttctcgaccttcctgtcgcgcaagctgttcaagggtgtcaacttc
gacatcgtgggcaagcgcaagtgggcctacgccttctcgaccatcgttattgtagtaggc
ttcgtgctgatggccattcagggcggcccgaacctgggcgttgacttccgcggcggccgt
gcctacgtggtggacttcaataaggacatggacgcttccaaggtgcacgacgccctggtg
gagcgggctttccagggggctggtacagaggtaaaaaccttcggcgccccaaaccgtctg
cgcatcaccaccggctacctggccgatgacgaatcggtagttgccgacaaaaaagtggaa
gctgccatggtttcggagctcaccaaagacttcgccgccgatgccccggttattaagtcg
acctcgaaagtaggtgccaccatcgccgacgacatcaagcgtacttcggtcctgagcctg
ggcctgacgctgctcggcatcttcatctacgtactgttccgcttcgagaagtggcagtac
tcgatggccgccgtagtggcgctcttccacgatgcgctgctggtaattgcctgctacccg
attgcccgtctgttcggcctcaactacgagatggaccagattttcgtggccgccgtgctt
accgtaatcggcttctcgatgaacgacaccgtggttatttacgaccggatccgcgagtac
ctgcgggaaaacccgaagctgacgtttgcgcaggtagccaacccggccctgaactccacg
ttctcgcgtaccatgattacgttcaccacggtattcctggtggtggccgtactctacatc
ttcgggggtgaaacgctacgctcgttctcgtttgccatgctcgtgggcatgatcttcggt
acgtactcgtcgctgttcattgccacgccgatcatcctcgacacctacggccgcaaagag
gcccgtgagcggggcaccgatatgtcgacgcacatcggcgacggcaccgacgccccgaaa
ctctcgacggcgcaggtataa
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