Hymenobacter sp. APR13: N008_12435
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Entry
N008_12435 CDS
T03213
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
hym
Hymenobacter sp. APR13
Pathway
hym00260
Glycine, serine and threonine metabolism
hym00270
Cysteine and methionine metabolism
hym00450
Selenocompound metabolism
hym00670
One carbon pool by folate
hym01100
Metabolic pathways
hym01110
Biosynthesis of secondary metabolites
hym01230
Biosynthesis of amino acids
Module
hym_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
N008_12435
00270 Cysteine and methionine metabolism
N008_12435
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
N008_12435
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
N008_12435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hym04147
]
N008_12435
Enzymes [BR:
hym01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
N008_12435
Exosome [BR:
hym04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
N008_12435
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Met_gamma_lyase
DegT_DnrJ_EryC1
Alliinase_C
Motif
Other DBs
NCBI-ProteinID:
AII52778
UniProt:
A0A076HUJ2
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All DBs
Position
2898277..2899416
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AA seq
379 aa
AA seq
DB search
MKFGTKAIHAGVHPDPETGAIMTPIYQTSTYVQRSPGDHKGYEYSRTHNPTRTQLQDALA
ALENGQHGLAFASGMAAIDCIIKLLQPGDEVISTNDLYGGSYRIFTKVFANYGIKFHFVP
MHDMAAVEEKVTANTKLIWVETPTNPLLNVIDIEAAAAVAKKAGALLVVDNTFSTPYLQT
PLDLGADMVMHSLTKYMGGHSDVVMGAVIVKDDELHERLRFLQNACGGTPGPQDCFLVLR
GLKTLHLRMQRHCENGRAVAEYLKSHPKVEKVFWPGFAEHPNHAVAAKQMRDFGGMISFV
LKGDRKEDAVAVLEKFELFSLAESLGGVESLSGHPATMTHASIPAEERRKAGLSDSLIRL
SVGIEDVEDLIEDLKQAIG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcggaaccaaagccatccatgccggcgtgcaccccgaccccgaaaccggggcc
atcatgacgcccatctaccagacctcgacctacgtgcaacgctcgcccggcgaccacaag
ggctacgagtactcgcgcacgcacaaccccacccgcacccagctccaggacgcgctggcg
gcgctggaaaacggccagcacggcctggctttcgcctcgggcatggccgctatcgactgc
atcatcaagctgctgcagcccggcgacgaggtcatcagcaccaacgacctgtacggcggt
tcctaccgcatcttcaccaaggtattcgccaactacggcatcaagtttcacttcgtgccg
atgcacgacatggcggctgtagaggagaaagtgacggccaataccaagctgatttgggtg
gaaacgcctacgaatccgctgctcaacgtcatcgatattgaagccgccgccgccgtggcc
aaaaaggccggcgcgctgctggtagtggacaataccttctcgacgccgtacctgcagacg
cccctggacctgggcgccgacatggtgatgcactcgctgaccaagtacatgggcggccac
tccgacgtggtgatgggcgccgtgattgtgaaggacgacgagctgcacgagcggctgcgt
ttcctgcagaacgcctgcggcggcacgcccggcccgcaggactgctttctggtgctgcgc
ggcctgaaaaccctgcacctgcgtatgcagcgccactgcgaaaacggccgcgccgtagcc
gagtacctcaagagccaccccaaagtggagaaagtgttctggcctggcttcgcggagcac
cccaaccacgccgtggcggccaagcagatgcgcgacttcggcggcatgatttccttcgtg
ctcaaaggcgaccggaaagaggacgccgtggccgtgctggagaagttcgagctgttttcg
ctggccgaaagcctgggcggcgtggaaagcctctcgggccaccccgccaccatgacgcac
gccagcattccggccgaggagcgccgcaaggccggcctctccgactcgctgattcggctg
agcgtgggcatcgaggacgtggaagatttgattgaagatttgaagcaagccatcggctag
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