KEGG   Hymenobacter sp. APR13: N008_15530
Entry
N008_15530        CDS       T03213                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hym  Hymenobacter sp. APR13
Pathway
hym03420  Nucleotide excision repair
hym03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hym00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    N008_15530
   03430 Mismatch repair
    N008_15530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hym03400]
    N008_15530
Enzymes [BR:hym01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     N008_15530
DNA repair and recombination proteins [BR:hym03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     N008_15530
   MMR (mismatch excision repair)
    Other MMR factors
     N008_15530
SSDB
Motif
Pfam: UvrD-helicase UvrD_C_2 UvrD_C Viral_helicase1 AAA_19 PhoH DEAD SLFN-g3_helicase AAA_30 NACHT AAA_16 nSTAND3 NB-ARC
Other DBs
NCBI-ProteinID: AII53384
UniProt: A0A076I057
LinkDB
Position
complement(3651857..3653902)
AA seq 681 aa
MNATEQEEKEYLEEIKEKLTLAVRRVDNAVKQFSTELRQKKEYIHENQSGMDEADMVAAD
QSINRMALTGEGAVGRKRRLLKLVQSPYFGRLDFGAKNQPAVPVYIGVHSFFDEQQRQNL
IYDWRAPISSLFYDFELGEASYATPSGTVQGRIELKRQYKIRDGRLEFLLDSDVNIHDDV
LQQELAKSSDDKMKNIVATIQRDQNAVIRNEEATVMVIQGVAGSGKTSIALHRIAFLLYR
YRETMAAKDLLIISPNKVFADYISNVLPELGEEHLPEMGMEELAADLLEGRYQFQTFFEQ
VTALLERHDAAFIERIRFKSSFEFLSQLNQYLLHIENNYLTVTELRVGRTVVPAAFIQQK
FRTYHRVPLLKRFALVANDVRAHVRDAVGRKLTGQEKGTIGEALPRMFRLHQVPELYRDF
YHWIGRPELLKMHPGQPLEYADVFALIYLRIRLEGLPGYDHVKHLLIDEMQDYTPVQYAV
LSRLFHCRKTILGDVSQTVNPYSASSAETIERVFPQAEVVRLYRSYRSTLEITAFAQRIT
PNPHIMPLERHGPAPAVRQFGSRDEELQALGQLIADFPGSGHHSLGIICKTLRQAEQAFE
ALEAAGVYLLTDESTKFKEGIILTTAHLAKGLEFDAVVVPFVSARVYKTEVDRSMLYVAC
TRAMHQLTLTYSGELTSFLSA
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgaacgctaccgaacaggaagaaaaagagtacctggaagaaatcaaggagaaactcacg
ctggccgtgcgccgcgtggacaacgccgtgaagcagttctccaccgagctgcgccagaaa
aaggagtacatccacgaaaaccagtcgggcatggacgaggccgacatggtggccgccgac
cagtccatcaaccgcatggccctcacgggcgaaggcgccgtgggccgcaagcgccggttg
ctcaagctggtgcagtcgccctacttcggccgcctcgatttcggcgccaaaaaccagccg
gccgtgccggtgtatattggggtgcattcgttttttgatgagcagcagcgccagaacctg
atttacgactggcgcgcgcccatttcctcgctgttctatgatttcgagctgggcgaggcg
tcgtacgctacgccgtcgggcacggtgcagggccgcatcgagctgaagcgacagtacaag
atccgggacggccgcctggagttcctgctcgacagcgacgtgaacatccacgacgacgtg
ctgcagcaggagttggccaaatcctccgacgataagatgaagaacatcgtcgccaccatt
cagcgcgaccagaacgcggttatccgtaatgaggaggccacggtgatggtgattcagggg
gtggccggctcgggtaaaacctccattgccctgcaccgcattgcgtttctgctctaccgc
taccgcgaaaccatggccgccaaggacctgctcatcatctcgcccaacaaggtctttgcc
gactacatttccaacgtgctgcctgagctgggcgaggagcacctgccggaaatgggcatg
gaggagctggccgccgacctgctggaaggccgctaccagttccagacctttttcgagcag
gtaacggccctgctggagcgccacgacgcggcctttattgagcggatccggttcaagtcg
tcgtttgagttcctgagccagctcaatcagtatctgctccacatcgagaataattacctc
accgtaacggagctgcgcgtgggccgcacggtggtgccggctgctttcattcagcagaag
ttccggacctaccaccgggtgccgctgctgaagcggtttgcgctggtggccaacgatgtg
cgggcccacgtgcgcgacgccgtgggccgcaagctcacgggccaggagaagggcaccatc
ggcgaggccctgccccgcatgttccggctgcaccaggtgccggagctttaccgcgacttt
taccactggatcgggcggcccgagctgctgaagatgcaccccggccagccgctggagtac
gccgacgtgtttgccctgatttacctgcgtatccgcctggaaggcctgcccggctacgac
cacgtcaagcacctgctgatcgacgagatgcaggactacacgcccgtgcagtacgccgtg
ctgtcgcgcctgttccactgccgcaaaaccatcctcggcgacgtgagccagacggtgaac
ccctacagcgcatcatcggccgaaaccattgagcgggtgtttccgcaggccgaggtagtg
cgcctctaccgcagctaccgctccaccctcgaaattacggccttcgcccagcgcatcacg
cccaacccgcacatcatgccgctggagcggcacggccccgcgcccgccgtgcggcagttc
ggcagccgcgacgaggagctgcaggccctggggcagctgatagcggacttccccggctcc
ggccaccactccctgggcattatctgcaagacgctgcggcaggcggagcaggctttcgag
gcgctggaagcagcgggcgtgtacctgctcaccgatgagtccacgaagttcaaggaaggc
atcatcctcaccacagcccacctggccaaggggctggagtttgatgcggtagtggtaccg
ttcgtatcggcccgcgtttacaaaacggaggtggaccgcagcatgctgtacgtggcctgc
acccgcgccatgcaccagctcacgctcacctattccggagagctgacgagctttctgtcg
gcctga

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