Hymenobacter sp. APR13: N008_17030
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Entry
N008_17030 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hym
Hymenobacter sp. APR13
Pathway
hym00061
Fatty acid biosynthesis
hym00071
Fatty acid degradation
hym01100
Metabolic pathways
hym01212
Fatty acid metabolism
hym02024
Quorum sensing
hym04146
Peroxisome
Module
hym_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
N008_17030
00071 Fatty acid degradation
N008_17030
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
N008_17030
09145 Cellular community - prokaryotes
02024 Quorum sensing
N008_17030
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hym01004
]
N008_17030
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hym04147
]
N008_17030
Enzymes [BR:
hym01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
N008_17030
Lipid biosynthesis proteins [BR:
hym01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
N008_17030
Exosome [BR:
hym04147
]
Exosomal proteins
Exosomal proteins of breast milk
N008_17030
Exosomal proteins of breast cancer cells
N008_17030
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Phage_TTP_13
Motif
Other DBs
NCBI-ProteinID:
AII53671
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Position
4007528..4009297
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AA seq
589 aa
AA seq
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MTFSRTFDLLAHLAHTTPEADCLVEKRDGRWQPLSAAKVQEMSNHASLGLRALGVRAADK
VAIICPNRPEWVVADMGIAQLGAVSVPMYPTITVEDYRHIFQDAGVRVVLVEGEKLLARV
QEAVAGLPDGPEHILTFEPTPGHRSFADLLALGAAADVAALEPLKAAVQPDDLLTLIYTS
GTTGRPKGVMLSHRNILFNCQNLLSYLPLAPGHKTLSFLPLSHIFERTATFLYLQLGFSI
YYAESVERIADNLREVQPHVFTTVPRLLEKIYDKIVATGQQLTGVKRKLFFWALDLGLRY
DTQQDQGAWYNAQLALANKLVFSKWREAMGGEVRYIVSGGGALQPRLARVFWAAGIRVME
GYGMTETSPVIAASQPVPEGNLIGAVGPVLPGVEVKIAADGEILTRSPSVMQGYYNRPDL
TAEVIDAEGWLHTGDIGELVQGRFLKITDRKKEMFKTSNGKYVAPQPLESKLSESPLVEQ
VMVLGEGEKYAAALLVPAFTELRAWARQHQLPADLSDAALAAHAQVRQLYEQLVQQTNAA
FAQWEQIKKIELLPALWSVESGELTPTLKVRRKIISQNNQQRIEKLFRG
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgacgttttcccgcaccttcgacctgctggctcacctggcccataccacccccgaggcc
gattgcctggtagaaaaaagggacggccgctggcagccgttgagtgccgccaaggtgcag
gaaatgagcaaccacgccagcctggggctgcgtgcgttgggcgtgcgggccgccgataag
gtggccatcatctgccccaaccgccccgagtgggtggtggccgatatgggcattgcccag
ctgggggccgtgagcgtgcccatgtaccccaccatcacggtggaggattaccgccacatt
ttccaggatgccggcgtgcgcgtggtgctggtggaaggcgaaaagctgctggcccgggtg
caggaggccgtggccgggctgccagacggccccgagcacattctcactttcgagcccacg
cccggccaccgctccttcgccgacctgctggccctgggagccgccgccgacgtggccgcg
ctggaacccctcaaagccgccgtgcagcccgacgacctgctcacgctcatctacacctcg
ggcactaccggccggcccaagggcgtgatgctcagccaccgcaacatcctgttcaactgc
cagaatctgctgagctacctgccgctggccccgggccacaaaaccctcagctttctgccc
ttgagccacattttcgagcgcacggccacgtttctgtacctgcagctgggcttcagcatc
tactacgccgaaagcgtggagcgcattgccgacaacctgcgcgaggtgcagccccacgta
ttcaccacggtgccccgcctgctcgaaaaaatctacgacaagattgtggccactggccag
caactcaccggcgttaagcgcaagctgttcttctgggccctcgacctggggctgcgctac
gacacccagcaggaccagggcgcatggtacaacgcccagctggcactggccaacaagctg
gtgttcagcaagtggcgcgaggctatgggcggggaggtgcgctacatcgtgagcgggggc
ggggccctgcagccgcggctggcgcgggtgttctgggcggccggtatccgggtgatggag
ggctacggcatgaccgaaacctcgcccgtaattgccgccagccagcccgtgcccgagggc
aacctcattggggccgtggggccggtgctgccgggcgtggaagtgaaaattgccgccgac
ggcgaaatcctgacccgttccccctcggtgatgcagggctactacaaccgccccgacctt
actgctgaggtcatcgacgccgagggctggctgcacaccggcgacatcggcgagttggta
cagggccgctttctcaaaatcacggaccgcaaaaaggagatgttcaagacctccaacggc
aagtacgtggccccgcagcccctcgagtcgaagctctcggagtcgccgctggtggagcag
gtgatggtgctgggcgagggcgaaaagtacgccgccgccctgctggtgcccgccttcacc
gagctgcgcgcctgggcccggcagcaccagctccccgccgacctctccgacgctgccctg
gccgcccacgctcaggtgcgccagctctacgagcagctggtgcagcaaaccaacgccgcc
ttcgcccagtgggagcagatcaagaaaatcgagctgctgcctgccctctggagcgtggaa
tcgggcgagctgacgcccacgctgaaagtgcgccgcaaaatcatcagccaaaacaaccaa
cagcgcatcgagaagctgtttcggggctag
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