KEGG   Hymenobacter sp. APR13: N008_17160
Entry
N008_17160        CDS       T03213                                 
Name
(GenBank) hypothetical protein
  KO
K19036  ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
Organism
hym  Hymenobacter sp. APR13
Brite
KEGG Orthology (KO) [BR:hym00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hym03009]
    N008_17160
   03012 Translation factors [BR:hym03012]
    N008_17160
Enzymes [BR:hym01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     N008_17160
    5.6.2.5  RNA 5'-3' helicase
     N008_17160
Ribosome biogenesis [BR:hym03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   N008_17160
Translation factors [BR:hym03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    N008_17160
SSDB
Motif
Pfam: AAA_11 AAA_12 AAA_30 AAA_19 Viral_helicase1 UvrD-helicase DEAD SLFN-g3_helicase nSTAND3 AAA_16 SMUBP-2_HCS1_1B ResIII Helicase_RecD AAA_22 HEM4 PhoH AAA_25 T2SSE Flavi_DEAD UvrD_C_2 AAA NPHP3_N AAA_24 DAP3 Zot AAA_5 Fasciclin ATPase cobW TsaE Herpes_ori_bp
Other DBs
NCBI-ProteinID: AII53697
UniProt: A0A076HYG0
LinkDB
Position
complement(4040225..4042240)
AA seq 671 aa
MLETNPTIEPKLLAEQPTYTEPYALEKELRKVQALMKLEQQEDLEQFKIKSAQATIAERQ
KRGLTWYPVKITKEDIGFGGKLVIELERQGGSGLHLFQVGKNAALFGNIPGRSGSDRPTL
SGVVTSVKRNKILLATTKEDLPDWVDEGKLGVDLTFDEVSYREMEYALGKVMGAYDSRLA
ELRDVLLGAKPARFKPESEATLYYPSPLNESQLSAVRHVLAAQDVAIIHGPPGTGKTTTL
VQAILETIRRERRVLVCAPSNTAVDLLTEKLAERGVNVIRMGNPSRVSDLLLQHTLDAQI
MAHKSYPELRSLRQTAEQYREQAGKFKKHFGWEEREQRRLLKQQAHELLQESDQLERYIT
EDLLEQVQVITCTLVGAGNRAIRHLTYETVFIDEAAQALEPGCWIPITKANRVVLAGDHQ
QLPPTVKSEKAARDGLRETLFEKCIRRQPDTARMLQVQYRMHEQIMEFSSQQFYDGKLVA
APTVAHADLPDYDLRFAPDLAVEFLDTAGFGFQEITIEESRSTANPEEADLLLKRLAQLL
EPYDQADHEADLLTIGVIAPYRAQINYLKDAIEENDELVGLMEHRMLSVGTVDSFQGQER
DIIAISLTRSNPQGEIGFLSDIRRMNVGMTRARRKLLLVGDSSTLGAHPFYKAFLDYVES
IGAYRTAWEMQ
NT seq 2016 nt   +upstreamnt  +downstreamnt
ttgttagaaaccaaccctacaatagaacccaagctgttggctgaacaacctacctatacc
gaaccttacgccctcgaaaaggagctgcgcaaggtgcaggccctcatgaagctcgagcag
caggaggacctcgaacagttcaaaattaagagcgcccaggccaccattgccgagcgccag
aagcggggcctcacctggtacccggtcaaaatcacgaaggaagacatcggcttcggtggc
aagctcgtcattgagctggagcgccagggcggcagcgggctgcacctgtttcaggtgggc
aaaaacgcggctttgttcggcaacatccccggccgctcgggctccgaccggcccacgctg
tcgggcgtggtgaccagcgtcaagcgcaacaaaatcctgctcgctaccactaaggaggac
ctgcccgactgggtggacgagggcaagctgggcgtggacctgaccttcgacgaggtgagc
taccgcgagatggagtacgccctgggcaaggtgatgggcgcctacgactcgcgcctggcc
gagctgcgcgacgtactgctgggcgccaaaccggcccgcttcaagccggagtcggaagcc
acgctctactacccctcgcccctgaacgaaagccagctgtcggccgtgcgccacgtgctg
gcggcccaggatgtagccatcatccacggcccgcccggcaccggcaaaaccaccaccctg
gtgcaggccatcctggaaaccatccggcgcgagcggcgggtgctggtgtgcgcccccagc
aacacggccgtggatttgctgacggaaaaactggccgagcgcggcgtgaacgtcatccgg
atgggcaacccttcgcgcgtgtctgacctgctgctgcaacacacgctggacgcccagatt
atggcgcacaagagctaccccgagctgcgcagcctgcgccagacggccgagcagtaccgg
gagcaggccggcaagttcaagaagcactttggctgggaggaacgcgagcagcgccggttg
ctcaagcagcaggcccacgagctgctgcaggagtcggaccagctggagcgctacatcacg
gaggatctgctggagcaggtgcaggtgattacctgcacgctggtaggggccggcaaccgc
gccatccgccacctcacctacgaaaccgtgttcatcgacgaggccgcccaggccctggag
ccgggctgctggattccgattaccaaggccaaccgcgtggtgctggccggcgaccatcag
cagctgccgcccaccgtgaaaagcgaaaaggcggcccgcgacggcctgcgcgaaaccctg
ttcgagaagtgcatccgccgccagcccgacacggcccgcatgctgcaggtgcagtaccgc
atgcacgagcagatcatggagttcagctcccagcagttctacgacggcaagctggtggcc
gcccccaccgtggcccacgccgatttgcccgactacgacctgcgcttcgcccccgacctg
gcggtggagtttcttgatacggccggctttggcttccaggaaatcaccatcgaggaaagc
cgctccacggccaaccccgaggaagccgacctgctgctcaagcgcctcgcgcagctgctg
gagccctacgaccaggccgaccacgaagccgacctgctcaccatcggcgtgattgcgcct
taccgcgcccagatcaactacctcaaggacgccatcgaggaaaacgacgagctggtgggc
ctcatggagcaccgcatgctgagcgtaggcaccgtggactcgttccagggccaggagcgc
gacatcatcgccatcagtctcacccgctcgaacccccagggcgaaatcggctttctgagc
gacatccgccgcatgaacgtgggcatgacccgggcccgccgcaagctcctgctcgtgggc
gactccagcaccctgggcgcgcaccccttctacaaggccttccttgattacgtggaaagc
atcggggcgtatcggacggcctgggagatgcagtag

DBGET integrated database retrieval system