Hymenobacter sp. APR13: N008_18025
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Entry
N008_18025 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hym
Hymenobacter sp. APR13
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hym01002
]
N008_18025
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hym01011
]
N008_18025
Peptidases and inhibitors [BR:
hym01002
]
Cysteine peptidases
Family C82
N008_18025
Peptidoglycan biosynthesis and degradation proteins [BR:
hym01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
N008_18025
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
DUF1161
Motif
Other DBs
NCBI-ProteinID:
AII53867
UniProt:
A0A076HYY1
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Position
complement(4227046..4228449)
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AA seq
467 aa
AA seq
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MPAEGLRMESPFPLVSGPGAVVSLRTLLDTVALGSTATYEKLALKAGFAVQSFYLQRNFA
PAWTHPDSGWNHSATQALSLLKRAPAFGLNPESYAWPLLQSLPDSLQHASSVAGSLSGFE
LRLTDALLRYAAHLRYGRLQPFTTIPASLSELAAQQSIERLTYALAAAEFETAFLACQPT
SATYQALQQVWRRTLPPDSVLTGLAQPTYGNAADFRRVALNLERLRWDVALPDSETYIVV
NIPTYSLHIVENGRVVRTHRVVVGKPETPTPVLSSRITVFMTAPEWRVPHSIAVREILPE
LQEDPGFLADNNYHLFDARNRPVNPWRVRWSRVTPQTFGYTIRQEAGRHNALGNLVFYFA
NQHAIYLHDTPARALFREPRRARSHGCIRVEKPLELAAYLLGREKQQAALPDIRRNISTH
TTCRYDLAQGLPIRIRYTTCEVQNSRLRFHPDIYCLDEDLDTVLASP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgccggcagagggcttgcgcatggaatccccattcccgctggtctcgggcccaggcgcg
gtagtttcgctgcgcaccctgctggatacggtagctctcggctcgacggccacttacgag
aagctagccctcaaagccggtttcgcggtccagtccttctatctgcagcgcaacttcgcc
cctgcctggacgcaccccgattccggctggaaccatagcgctacccaggcgctttccctg
ctcaagcgcgcccccgcctttggacttaaccccgagtcctatgcctggcccctgctacag
tccctgcccgactcgctgcagcatgcctccagtgtggccggcagcctaagtgggtttgag
ttgcgcctgacagacgcgctgttgcgctacgctgcccacctgcgctacggacggcttcaa
ccattcactacaattcccgcttctctgagcgagctggcagcccaacaaagcatcgaacgg
ctcacgtatgcgttggctgcggcagagtttgaaacagcatttctagcatgccaacccact
agtgccacgtaccaagccctgcaacaagtatggcgccgcacgctcccccccgattcggta
ctgacgggtctggcacagccgacatacggtaacgcggccgattttcgccgggtagccctc
aacctggagcggctgcggtgggatgtggccctacccgactcggaaacgtacatagtggtt
aatattccgacgtattcgctgcacatcgtggaaaatgggcgcgttgtccggacgcaccgg
gttgtggtcggcaaaccggaaacgccgactcctgttctcagcagccgcattacggtgttc
atgacggcccccgagtggcgcgtaccacatagcatcgccgtgcgcgagattttgcccgaa
ttacaggaagaccccggatttctggctgataacaattatcacctgtttgatgcccgcaac
cgtccggttaatccgtggcgagtccgctggagccgcgtaaccccacaaacctttggctat
acaattcgacaggaagccggcagacataacgctctgggcaatctggtattctacttcgcc
aatcagcatgccatctatcttcatgacacgccagctcgggccctgtttcgggagccgcgt
cgcgcgcgcagccatgggtgcatccgggttgaaaaaccgctggagctggcagcttatttg
ttagggcgagaaaagcagcaagccgccctacccgacatccgacgcaacatctccacccat
actacctgccggtacgacctggctcaaggcctgccgatccgcatccgttataccacatgt
gaagttcaaaatagccgcttacgctttcatccggatatctactgcctagatgaggacctg
gatactgtgttagcatctccttga
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