Hymenobacter sp. APR13: N008_18040
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Entry
N008_18040 CDS
T03213
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hym
Hymenobacter sp. APR13
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hym03032
]
N008_18040
03400 DNA repair and recombination proteins [BR:
hym03400
]
N008_18040
Enzymes [BR:
hym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
N008_18040
DNA replication proteins [BR:
hym03032
]
Prokaryotic type
DNA Topoisomerases
N008_18040
DNA repair and recombination proteins [BR:
hym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N008_18040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AII53870
LinkDB
All DBs
Position
4229887..4232448
Genome browser
AA seq
853 aa
AA seq
DB search
MAEGEKIIPINIEDEMRGAYIDYSMSVIISRALPDVRDGLKPVHRRVLYGMSELGVSYNK
SYKKSARIVGEVLGKYHPHGDSSVYDTMVRMAQDWSLRYPLVDGQGNFGSVDGDSPAAMR
YTEARLKRLADELLGDLDKETVDFQPNFDDSLEEPSVMPAKFPNLLVNGTTGIAVGMATN
MAPHNLTEVVSGIIAYLDNTDITVAELMEHVLAPDFPTGGTIYGYEGVKQAFETGRGRIV
VRAKAHFETLPSGKEQIIITEIPYMVNKASMIEKTAALINEKKIEGIADLRDESDRDGMR
IVYDLKRDAMPNVVLNQLYRYTQLQSSFGVNNVCLVKGRPMTLNLKELIHYFVEHRADVV
VRRTRYELAEAQKRAHILEGLLIALDHLDEVIALIRGSRDGEVARGQLIERFSLSEVQAR
AILDMRLQRLTGLERDKIVQEYDELMKLVDYLKSVLASEELQRQIIKDELIDIRERYGDK
RRTAIEYAGGDFSMEDMIADESMVITISNDGYIKRTPLAEYRAQGRGGIGARGAGSKQDD
FTEHLFVATTHEYLLFFTELGRVFWLKVYEVPEGGKGAKGRPIQNLIEIPREDSVRSVLN
VRGLRDPDYLENTYLMFCTEQGTVKKTPLEAYSRPRTAGINAITINEGDRLLDVRLTNGN
SEIVVALRSGRAVRFPEGKVRSMGRTAAGVRGITLASDTDRVVGMVCVSDPTQELLVVSE
NGYGKRSELEEYRITNRGGKGVQAMKITEKTGALVAIKDVNDTDDLMIINKSGLTIRLRV
ADLRIIGRATQGVRLLKINEGDEISSVAKVAAEEEKEAELDALTGEGLTSAVEVADVTAE
PEAADDADSVPTE
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggcgaaaaaatcattccgattaacatcgaagacgagatgcgcggcgcctac
atcgattactcgatgtcggttatcatctcccgggccctgcccgacgtgcgcgacggcctc
aagcccgtgcaccggcgcgtgctctacggcatgagcgagctgggcgtttcctacaataag
tcctacaagaaatcagcccgtatcgtgggcgaggtgctaggtaagtaccacccgcacggc
gactcctccgtgtacgacacgatggtgcgtatggcccaggactggagcctgcgctacccg
ctcgtggacggtcagggtaacttcggctccgtcgacggcgactcaccggcggctatgcgc
tacaccgaggcccgcctcaagcgcctcgccgacgagctgctgggcgacctggacaaggaa
actgttgacttccagcccaacttcgacgactcgctggaagagccgagcgtgatgccggcc
aagtttccgaacctgctggtgaatggcactaccggcattgccgtgggtatggccaccaac
atggccccgcacaacctcaccgaagtggtgagtggcatcattgcctacctcgacaacacg
gatatcaccgtggccgagctcatggagcacgtactggcgcccgacttcccgaccggtggc
accatctacggctacgaaggcgtgaagcaggcctttgaaaccggccgtggccgcattgtg
gtgcgggccaaggcgcacttcgaaaccctgcccagcggcaaggagcagatcatcatcacc
gaaattccctacatggtgaacaaggcgtcgatgatcgagaagacggcggccctcatcaac
gagaagaagatcgaaggcatcgccgacctgcgcgacgagtccgaccgcgacgggatgcgc
attgtctacgatctgaagcgcgacgccatgcccaacgtggtgctcaaccaactctaccgc
tacacgcagctgcagtcgtcgttcggcgtcaacaacgtgtgcctggtgaaagggcgcccg
atgacgctcaacctcaaggagctgatccactacttcgtggagcaccgcgccgacgtggtg
gtgcgccgcacgcgctacgagctggccgaagcccagaagcgcgcccacatcttggaaggt
ctactcatcgccctcgaccacctcgacgaggtgattgccctgatccggggctcccgcgac
ggcgaagtggcccgcggccagctgattgagcgcttctcgctgagcgaggtgcaggcccgc
gccatcctcgatatgcgcctgcagcgcctcaccggcctggagcgcgacaagattgtgcag
gagtacgacgagctgatgaagctggtcgattacctgaagtcggtgctggcctccgaggag
ctgcagcgccagattatcaaggacgagctgatcgatattcgggagcggtacggcgacaag
cgccgcacggccatcgagtacgccggcggcgatttctcgatggaagacatgattgccgac
gagagcatggtgattaccatctccaacgacggctacatcaagcgcaccccgctggccgag
taccgggcgcagggccgcggtgggataggtgcccggggcgccggctccaagcaggacgac
ttcaccgagcacctattcgtagccaccacccacgagtacctgctgttcttcacggagctg
ggccgggtgttctggctgaaggtgtacgaagtgccggaaggcggcaaaggcgccaaaggc
cgccctatccagaacctgattgagattccacgcgaagactcagtacgctccgtgctgaac
gtgcgcggcctccgcgacccggactacctggaaaacacttacctgatgttctgcaccgag
cagggcacggtgaagaagactcccctggaagcctattctcgtccgcggacggccggtatc
aacgccattaccatcaacgagggcgaccggctgctcgacgtgcgcctgaccaacggcaac
tccgaaattgtggtggcgctgcgttccggtcgcgctgttcgtttccccgaaggcaaagtg
cgctccatgggccgcacggctgccggtgttcgtggcatcacgctggcttcggataccgac
cgggtagtaggcatggtctgcgtttcggaccccacgcaggagctgctggtggtgtcggaa
aacggctacggcaaacgctcggagctggaagagtaccgcatcaccaaccgcggtggtaaa
ggggtgcaggccatgaaaatcaccgagaaaaccggtgcgctggtcgccatcaaggacgtc
aacgacaccgatgacctgatgattatcaacaaatcggggctcaccatccgcctgcgggtg
gctgatctgcgcatcatcggccgggccacccagggcgtccggctgctgaaaatcaacgag
ggtgatgaaatttcttcggtggcgaaagtcgcggccgaggaagaaaaagaagctgagctg
gatgcacttaccggtgaaggcctgacgtcggcggtagaagtagccgatgtgacggccgag
ccggaagctgccgacgatgcagattcggtgccgaccgaatag
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