Hymenobacter sp. APR13: N008_18460
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Entry
N008_18460 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hym
Hymenobacter sp. APR13
Pathway
hym03030
DNA replication
hym03430
Mismatch repair
hym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N008_18460
03430 Mismatch repair
N008_18460
03440 Homologous recombination
N008_18460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hym03032
]
N008_18460
03400 DNA repair and recombination proteins [BR:
hym03400
]
N008_18460
Enzymes [BR:
hym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N008_18460
DNA replication proteins [BR:
hym03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N008_18460
DNA repair and recombination proteins [BR:
hym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N008_18460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DUF7508
DNA_pol_A_exo1
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
AII53952
LinkDB
All DBs
Position
4320448..4322013
Genome browser
AA seq
521 aa
AA seq
DB search
MYAIIDLETTGGQPTQDRITEIAIFIHDGEKVVDQFDTLLNPGRPIPFFITQLTGISDEM
VKDAPKFHEVARKVVEMTEGCVFVAHNVRFDYSFLKKEFGDLGYTYSRKTLCTVRLSRSL
MPGQPSYSLGKLCQNIGIPLNGRHRAAGDAAATAILFDRLLKISQQEEALTQPGLSPADT
LAAVDANAPAGRRPAGAPARAAHTAPSALPASSSADAPAVVATKKPSARKVKAVQDAIRT
ALLPPNITPEKVASLPHEAGVYYFHDEKGEVIYVGKSINIYKRIQQHFAIDYKSRKSIEF
KNSISDITWELTGSELVALLYESHEIKRLKPLYNRKLRRSVFPAGIFLRTDEQGYKRLYY
GRADDHSNSHPLIALGNQFKAKGFLFHKVSKFNLCQKLCDLYKTNGSCFDYQVHRCKGAC
LGLEPAEEYNKRVEEAIESFTYEHGSFVVIGQGRRDDEKTVVVVEHGRYLGFGYVDTETF
TARRLDDFKEVINRYNDNKDAQQIIRQYLRTSHKDKVKVFK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgccatcatcgaccttgagaccaccgggggccagcccacgcaggaccgcatcacc
gaaattgccattttcattcacgatggcgaaaaggtggtcgaccagttcgacaccctgttg
aacccggggcgcccgataccctttttcatcacccagctcactggtatcagcgacgagatg
gtaaaggatgcgcccaaatttcatgaggtggcgcgcaaggtggtggaaatgactgagggc
tgcgtgtttgtggcccacaacgtgcggttcgactactcgtttctgaaaaaggaatttggc
gacctaggctacacatattcgcgcaaaacgctgtgcacggtgcgcctgagccgctcgctg
atgccgggccagcccagctacagcctgggcaagctgtgccagaacattgggattccgctc
aatggccgccaccgcgccgccggcgacgccgctgctaccgccatcctcttcgaccggctg
ctcaagatcagccagcaggaagaggcgctgactcagcccggcctctcccctgccgatacc
ttggccgccgtggatgccaacgccccggcaggacgccgccccgccggagcgcctgcccgc
gctgcccatacggctcccagcgccttgccggccagctcttccgccgacgccccggcagta
gtagccactaaaaaaccttcggcccgcaaggtgaaagccgtgcaggatgccatccggacg
gcgctgctgccacctaacattacccctgaaaaagtggcctcgctgccgcacgaggccggc
gtctactacttccacgacgagaagggcgaggtgatttatgtgggcaagagcatcaacatc
tacaagcggattcagcagcactttgccattgactacaagtcgcgcaaaagcatcgagttc
aagaactcgatttcggacattacctgggaactgacgggctcggagttggtggcactgctc
tacgaatcgcacgaaatcaagcgcctcaagccgctttacaaccgcaagctgcggcgctcg
gtgtttccggctggcatcttcctgcgcaccgatgagcagggctataagcgcctctactac
ggccgcgccgacgaccactccaactcacacccgctgattgcactgggcaatcagttcaag
gccaaaggctttctgttccataaggtatcgaagttcaacctgtgccagaagctctgtgac
ctgtacaaaaccaatggctcctgctttgactatcaggtgcaccgctgcaagggcgcctgc
ctgggcctggagcccgccgaggagtacaacaagcgggtggaagaagccatcgagagcttc
acctatgagcacggctcgttcgtggtcatcgggcagggccgccgcgacgacgagaagacc
gtagtagtggtggagcatggccgctacctcggcttcggctacgtggataccgaaaccttc
acggcccgccgcctcgacgatttcaaggaggtcatcaaccgctacaacgacaataaagac
gcccagcaaatcatccggcagtatttgcgcacctcgcacaaagacaaggttaaggtgttc
aaatag
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