Hymenobacter sp. APR13: N008_18485
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Entry
N008_18485 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hym
Hymenobacter sp. APR13
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hym03032
]
N008_18485
03400 DNA repair and recombination proteins [BR:
hym03400
]
N008_18485
Enzymes [BR:
hym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N008_18485
DNA replication proteins [BR:
hym03032
]
Prokaryotic type
DNA Topoisomerases
N008_18485
DNA repair and recombination proteins [BR:
hym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N008_18485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AII53957
UniProt:
A0A076HZ32
LinkDB
All DBs
Position
complement(4326749..4327864)
Genome browser
AA seq
371 aa
AA seq
DB search
MSTTTARPKTKKKHLLPLQEAHELYKDPARQAELAGLRYFTDAKPGLTRKATRTGNFSYH
TVAGDKITDEKVLTRIQGFVIPPAWTEVWISPSANTHLQVTGRDAKGRKQYLYHPAWDQA
RSLTKFSRLRAFGEKLADLRAQMHKDLARPALDKPKVMALVLTLMDKSFIRVGNREYAEK
NKTYGLTTLRDKHVQVSGADVRFAFVGKKGVAHDLTLHDRKLAKLVQKCKEIPGQHLFQY
YTPDGHRQELESGDVNEYLQQVTGLKLSAKDFRTWGGTVKMVECLERVLDEEPDFPKPKT
LKRALKDVAHDLGNTPTVCSKYYIHPQVMELFNSDKLIDYLRRHDANPAKNDLLTPTEHM
VLEMLAELEGK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtctactaccactgcccgccccaaaaccaaaaagaagcacctgctacccttgcaggaa
gcccacgagctctacaaagaccccgcccggcaggccgagctggccggcctgcgctacttc
accgatgccaagccgggcctgacccgcaaagccacccgcaccggcaacttcagctaccac
accgtggccggcgacaaaatcaccgacgaaaaagtgctgacccgcatccagggcttcgtg
attccaccggcctggacggaagtctggatttcgccctcggccaatacccacttgcaggtg
acgggccgcgacgccaagggccgcaagcagtacctctaccaccccgcctgggaccaagcc
cgcagcctcaccaagttcagccgcctgcgggccttcggcgagaagctggccgacctgcgc
gcccagatgcacaaagacctggcccgcccagcgctagacaaaccgaaggtgatggccttg
gtgctcacgctaatggacaagtcgtttatccgagttggcaaccgtgagtacgccgagaaa
aacaaaacctacggcctcactaccctccgcgacaagcacgtgcaggtaagcggcgccgac
gtgcgttttgccttcgtgggaaagaaaggcgtggcccatgacctcacgctgcacgaccgg
aagctggccaaactggtgcagaagtgcaaggaaattccgggccagcacttgttccagtat
tacacccccgacggccatcgacaggaactggagtccggcgacgtgaacgagtacctgcag
caggtaacgggcctcaagctttcggccaaggactttcgcacctggggcggcacagtgaag
atggtggagtgcctggagcgggtgctggatgaggagcccgattttccgaagcccaagacc
ttaaagcgcgccctcaaggacgtggctcacgacctaggcaatacgcccacggtgtgctcg
aaatactacatccacccgcaggtgatggagctgttcaactccgacaaactcatcgactac
ctgcgccgccacgatgccaaccccgccaaaaacgacctgctgacccccaccgaacacatg
gtgctggaaatgttggccgagctggaagggaaataa
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