Hymenobacter sp. APR13: N008_18715
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Entry
N008_18715 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hym
Hymenobacter sp. APR13
Pathway
hym00550
Peptidoglycan biosynthesis
hym01100
Metabolic pathways
hym01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N008_18715
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N008_18715
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hym01011
]
N008_18715
Enzymes [BR:
hym01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
N008_18715
Peptidoglycan biosynthesis and degradation proteins [BR:
hym01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
N008_18715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AII54003
UniProt:
A0A076HY51
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All DBs
Position
4374505..4376328
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AA seq
607 aa
AA seq
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MRTALISWRISLLALLASLAACSSPDQPNHPPTAPDVRVRYTARRVVLPQVPERGRILDR
HDSVLVATRPQFLLQLPRRYPLDTLALGELLGWDSTTVRRRIQDALPYPGAGPASYPGLL
RLTAAEVARVRQDSAAWPQLKLVEQRRRVYTSPAAAHALGYLSAEAQSFYRQARRTGRGR
FYRLRNGGVESYYNGLLRGHRGYQHPLLDKQGRQHGSWAPDTAFQQGQDLHLTLDVKLQT
YAEKLLGGRKGYLVALDPRTGEILAYVSGPVYPASALTAPDQAGVRAELLTHEDMPLLNR
PAMLANPPGSVFKLVNAAVALQLGAISPGTAFRCDQSLVSCVHHHRPATSLTLGLKYSCN
PYFYQVMQGVINHVPDSLVQDTVAARHVNLTQWRRYVRSFGLDSVLGVDLPREAPGFLPT
AAYYDKTRGSRRWTYRSIYSLSIGQGEINLTGLQMANMAAIVANRGWYYPPHLVRGVGAG
GPLPRFRQKRHTLIDSAHFAALVPGMVAVMERGGTADASSLADVGITVAGKTGTVENDEG
DDHAAFVGFAPADNPKIAVAVYLENGGFGATAAAPCAVMVMEKYLRGSIAAKRKNWERRI
MSRARRE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactgcccttatcagctggcggataagcctgctggcactgctggccagcctggcc
gcctgctcctctcccgaccagccaaaccaccctcccaccgcccccgacgtgcgcgtgcgc
tacacagcccgccgcgtggtgctgccccaggtgccggagcgcggccgcatcctcgaccgc
cacgactcggtgctggtggctacccgcccgcagtttctgctgcaactgccgcgccgctac
ccgctcgataccctggccctgggtgagctgctgggctgggactccaccaccgtacggcgg
cgcatccaagacgccctgccctacccgggcgccggccccgccagctaccccggcctgctg
cgcctgaccgccgccgaagtggcgcgcgtgcgccaggacagcgctgcctggccccagctg
aagctggtggagcagcgccgccgggtgtacacctccccggccgccgcccatgccttgggc
tacctcagcgccgaggcccagagcttttaccgccaggcccgccgcaccgggcggggccgc
ttctaccgcctgcgcaacggcggggtggaaagctactacaacggcctgctgcgcgggcac
cgcggctaccagcacccgctgctcgataagcagggccggcagcacggcagttgggccccc
gacacggccttccagcagggccaggatctgcacctcaccctggatgtgaagcttcagacc
tacgccgagaagctgctgggcggccgcaagggctacctcgtggccctcgacccgcgcacc
ggcgaaatcctggcctatgtttcggggccggtgtacccagccagcgccctcacggccccc
gaccaggctggggtgcgggccgagttgctgacccacgaggacatgcccctgctgaaccga
cccgccatgctggccaacccgcccggctcggtgttcaagctggtgaatgcagccgtggct
ctgcagctgggcgccatcagccccggcaccgcctttcgctgcgaccagagcctggtgagc
tgcgtgcaccaccaccgaccggccaccagcctcacgctgggcctcaagtacagctgcaac
ccctacttctaccaggtgatgcagggcgtcatcaaccatgtgcccgactcgctggtgcag
gacaccgtagcggcccgccacgtcaacctgacgcagtggcggcgctacgtgcgctccttc
ggtctcgattcggtgctgggcgtggatttgccccgcgaggcccccggcttcctgcccacg
gccgcctactacgacaaaacccggggcagccgccgctggacctaccgctccatctactcg
ctcagcatcggccagggcgaaatcaacctgacaggccttcagatggccaacatggcggcc
attgtggccaaccggggctggtactacccgccccacctggtgcgcggcgtgggcgcgggc
ggcccgctgccccgcttccgccagaagcgccacaccctcatcgacagcgcccactttgcg
gccctggtgcccggcatggtggccgtaatggagcgcggcggcaccgccgacgcctccagc
ctcgccgacgtgggcatcacagtagcgggcaagaccggaaccgtcgagaacgacgagggc
gacgaccacgccgccttcgtcggcttcgccccggccgataaccccaaaattgcggtggcc
gtgtacctggaaaacggcggtttcggggccaccgccgccgcgccctgtgccgtgatggtg
atggaaaaatacctacgcggctccattgcggccaagcgcaagaactgggaacggcgcatc
atgagccgggcgaggcgggagtag
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