Hymenobacter sp. APR13: N008_19740
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Entry
N008_19740 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hym
Hymenobacter sp. APR13
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hym03032
]
N008_19740
03400 DNA repair and recombination proteins [BR:
hym03400
]
N008_19740
Enzymes [BR:
hym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N008_19740
DNA replication proteins [BR:
hym03032
]
Prokaryotic type
DNA Topoisomerases
N008_19740
DNA repair and recombination proteins [BR:
hym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N008_19740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
PadR
Motif
Other DBs
NCBI-ProteinID:
AII54207
UniProt:
A0A076HZN9
LinkDB
All DBs
Position
4597632..4600118
Genome browser
AA seq
828 aa
AA seq
DB search
MVKNLVIVESPAKAKTIEGYLGKDFVVKSSFGHVRDLPKDNNAIDVANNFKPTYVVSADK
REIISQLKKLAKEAETVWLASDDDREGEAISWHLAETLNLTGSSKTRRIVFREITKNAIL
HAIDNPREIDLNLVNAQQARRVLDRLVGFELSPVLWKKVKTGLSAGRVQSVAVRLVVERE
REINQFKVSSAYRITARLDAGKGAVLEADLPTRYKTREEAEAFLARCAGAEYRIENLEKK
PGKRSPAPPFTTSTLQQEASRKLGFSVAQTMSVAQKLYEAGKISYMRTDSVNLSQDALTA
AQVEISRAYGAEYAQTRLYKTKSASAQEAHEAIRPTDFALMKAGSDSQEQRLYDLIRKRA
MASQMADAQIERTVATIGISTQPGVTLTATGEVITFEGFLKAYSESKDEEEQDEATTESS
FSRGLPPLTVGQLMPLLQLRGVERYAAPAARYTEASLVKKLEEMGIGRPSTYAPTISTIQ
KRGYVEKDTREGKERKFHVLTLEGSEVKTEVKTETYGADKAKMFPTDTAMVVNDFLVEHF
PVIVDFQFTAKVEGEFDRIADGEEQWTDMLAGFYGTFHETVERGKDIERNTLGSNREIGL
HPETGQKLTARLGRFGPYVQIEPKEGAPEDEKAVYASLRKGQFIENITLEEALELFKLPR
VVGEFEEKSMTAALGRFGPYIRHDSKFYSLTKEQDPHTITAPEAIELIENKRKTDAERLI
KTFEGRDDVQVLNGRFGPYIVVGKKNVKIPKGEEPADLTLERCLELGELTPDKPAKGGRF
AKKAPAADKADAADKPAKKPAAKKPAAKKPAAKKAAGTTAKKPAAKAK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaaatctagtcatcgtcgaatcccccgcgaaagccaaaaccattgaaggctat
ctgggcaaggatttcgtcgtcaaatcgtctttcgggcacgtccgtgacctgccgaaggat
aacaatgccattgacgtagccaacaacttcaagcccacctacgtggtgtcggccgacaag
cgggagattatcagccagctcaagaagctggctaaggaggccgaaaccgtctggctggcg
agtgacgatgaccgggagggcgaggctatttcatggcatctggccgaaaccctgaacctg
accggcagctccaagacgcgccgcatcgtgttccgtgaaatcaccaagaacgccatcctg
cacgccatcgacaacccccgggaaatcgacctgaacctggtgaatgcccagcaggcccgc
cgtgtcctcgaccggctggtgggcttcgagctgagcccggtgctctggaagaaagtgaaa
acgggcctttcggccggccgcgtacagagcgtggcggtgcggctggtagtggagcgcgag
cgggaaatcaaccagttcaaagtgtcgtcggcgtaccggattacggcgcgcctggacgcc
ggaaaaggcgccgtgctggaagccgacttgcccacgcgctacaaaacccgcgaagaggcc
gaggctttcctggcccgctgcgccggcgccgagtaccgcatcgagaacctggagaaaaag
cccggcaagcgcagccccgcgccgcccttcaccacgtctacgctgcagcaggaagcttcg
cgcaagctcggcttctcggtggcccagacgatgagcgtggcccagaagctgtacgaagcc
ggtaaaatttcctatatgcggactgactcggtgaacctctcgcaggacgccctgacggcc
gcgcaggtggaaatcagccgcgcatacggggccgaatatgcccagacccgcctctacaaa
accaagtcggcctcggcgcaggaagctcacgaagccatccgccccaccgacttcgccctg
atgaaagccggctccgactcgcaggagcagcgcctttacgacctaatccggaagcgggcc
atggcctcgcagatggccgatgcccagattgagcgcacggtggccaccatcggcatcagc
acccagcccggcgttacgctcacggctacgggagaggtcatcaccttcgagggtttcctg
aaagcctacagcgaaagcaaagacgaagaagagcaggatgaagccaccacggaatcgtcg
ttttcacggggcctgccgcccctgaccgtgggccagctgatgccgctgctgcagctgcgc
ggcgtggagcgctacgctgccccggccgcccgctacacggaagcctcgctggtgaaaaag
ctggaggaaatgggcattggccggccttccacctacgcgcctaccatcagcaccattcag
aagcgcggctacgtggaaaaagacacccgcgaaggcaaggaacgcaagttccacgtgctg
acgctggaaggcagcgaggtgaaaaccgaagtcaaaaccgaaacctacggggccgacaaa
gccaagatgttccccaccgacaccgccatggtggtgaacgacttcctggtggagcacttc
ccggtgattgtggacttccagttcacggccaaggtggaaggcgagtttgaccggattgcc
gacggcgaagagcagtggaccgacatgctggccggcttctatggcactttccacgaaaca
gtggagcgcggtaaggacatcgagcgcaacacgctgggcagcaaccgcgaaatagggctg
catcccgaaaccggccagaagctcaccgcccgcctcggccgcttcggcccctacgtgcag
attgagcccaaggaaggcgcgcccgaagacgaaaaggccgtgtacgccagcctgcgcaaa
gggcagttcattgagaacatcacgctggaagaggcgctggagctgttcaagctgccccgc
gtggtcggcgagtttgaggagaagtcgatgacggctgccctgggccgtttcggcccctac
atccgccacgacagcaagttctactcgctcaccaaggagcaggacccgcacaccatcacg
gcgcccgaggccattgagctgattgagaacaagcgtaagaccgacgccgagcgcctcatc
aagaccttcgagggccgcgacgacgtgcaggtgctgaacggtcgtttcgggccgtacatc
gtggtaggcaagaagaacgtgaagattccgaaaggcgaagagccagccgacctcacgctg
gagcgctgcctggagctgggcgagctgacgcccgacaagcccgccaaaggtggccgcttc
gccaagaaggcccccgccgccgacaaggccgacgccgccgacaagcctgcgaaaaaaccc
gccgccaagaagccggctgccaaaaagcccgccgcgaaaaaggcagctggcaccaccgcc
aaaaaaccggcggccaaagccaagtag
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