Hymenobacter sp. APR13: N008_19775
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Entry
N008_19775 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hym
Hymenobacter sp. APR13
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hym03032
]
N008_19775
03400 DNA repair and recombination proteins [BR:
hym03400
]
N008_19775
Enzymes [BR:
hym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
N008_19775
DNA replication proteins [BR:
hym03032
]
Prokaryotic type
DNA Topoisomerases
N008_19775
DNA repair and recombination proteins [BR:
hym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N008_19775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
TRSP
HisKin-conflict
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
AII54214
LinkDB
All DBs
Position
complement(4611157..4613043)
Genome browser
AA seq
628 aa
AA seq
DB search
MYIGDTGAKGLHHLVWEVVDNSIDEALAGQCDRIEVSIHPGNSISVQDNGRGIPVGINQK
FGKSALEIALTVLHAGGKFDKNSYKTSGGLHGVGVSCVNALSTHTHVKVQREGRMYEQEY
TIGVPQYDVREIGPADGRGTYVWFQPDGTIFDETLEYSYERIATRLRELAYLNRGIRIIL
TDLREQAADAEGQPLRTEFYSEGGVAEYVQYLDSSRTVLMTKPVYVATERGIPVEVAFQY
NDSYQEHIFSYVNNINTHEGGTHVAGFRSAITRVLKAYAEKSGEVAKAKIEIQGDDFREG
LTAVISVKVAEPKFEGQTKGKLGNSEVSGAVNQVVGEILNQYLEENPKEARVIVEKVILA
AKARVAAKKAREMVQRKTVLGSNSLPGKLADCSESDPAICELYLVEGDSAGGTAKQGRNR
AFQAILPLRGKILNVEKAQEHRIYENEEIRNMITALGVSFEKKTDEDDGSTSRSLNLDKL
RYHKVIIMTDADIDGSHIRTLILTFFFRYMPELIEKGYIYIALPPLYLVKRGKEERYCWT
EEERMAAQEEMGRGKPETVNVQRYKGLGEMNAEQLWTTTMQPDTRSLKRVDVDSGVEADH
LFSMLMGDEVAPRRDFIEKNAKYAKLDV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcggcgacactggcgcgaaaggccttcaccacctggtgtgggaggtagtggat
aactccattgacgaagccctggccggccagtgcgaccgaatcgaggtgagcattcacccc
ggcaactccatttctgtacaagacaacggccgcgggattcccgtcggcatcaaccagaag
ttcggcaaatcagccctcgaaattgccctgaccgtgctgcacgccggcggcaagttcgac
aagaacagctacaagacctccggcggcctgcacggcgtgggcgtgtcctgcgtgaatgcc
ctcagcacccacacccacgtgaaggtgcagcgcgaaggccgcatgtacgagcaggaatac
accattggcgtgccccagtacgacgtgcgcgaaatcgggcctgctgacggccgcggcacc
tacgtgtggttccaacctgatggcaccatcttcgacgaaacgctggagtactcctacgag
cggattgccacccgcctgcgcgagctggcctacctcaaccgcggcatccgcatcatcctc
actgacctgcgcgagcaggccgccgatgccgaaggccagccgctgcgcaccgagttctac
tcggaaggcggtgtggccgagtacgtgcagtacctcgacagcagccgcacagtgctcatg
accaagcccgtgtacgtggctacggagcgcggcattccggtggaagtggcgttccagtac
aacgactcgtaccaggagcacatcttctcctacgtcaacaacatcaacacccacgagggc
ggcacgcacgtggcaggcttccgctcggccattacgcgggtgctgaaagcctacgccgag
aaatcgggcgaggtggccaaggccaaaattgaaattcagggcgacgacttccgcgaaggc
ctcaccgccgttatttcggtgaaggtggccgagcccaagtttgagggccagaccaaaggc
aagctgggcaactccgaagtgagcggcgccgtgaaccaggtagtaggcgaaatcctcaat
cagtatctggaggaaaaccccaaggaagcccgcgtcatcgtcgagaaggtgattctggct
gccaaagcccgcgtagccgccaagaaggcccgcgaaatggtgcagcgcaaaaccgtgctg
ggctccaactcgctgcccggcaagctcgccgactgctcggagtcagaccccgccatctgc
gagctgtacctggtggaaggtgactcggctggcggcaccgccaagcagggccgcaaccgc
gccttccaggccattctgccgctgcggggtaagatcctgaacgtagagaaggcccaggag
caccgcatctacgaaaacgaggaaatccggaacatgattacggccctcggcgtgagcttc
gaaaagaagaccgacgaagacgacggcagcaccagccgctcgctgaacctcgacaagctg
cgctaccacaaggtcatcatcatgaccgatgctgacatcgacggctcgcacatccggacc
ctgatcctgacgttcttcttccgctacatgccggagctgatcgagaaaggctacatctac
atcgcgctgccgccgctgtatctggtgaagcgcggcaaggaagagcgctactgctggacc
gaagaggagcgcatggctgcccaggaagaaatgggccgcggcaagcccgaaacggtgaac
gtgcagcgctacaaaggcctcggcgaaatgaacgccgagcagctctggaccaccaccatg
cagcccgacacccgctccctgaagcgtgtagacgtggactcgggcgtggaagccgaccac
ctcttctccatgctgatgggcgacgaagtggccccccgccgcgacttcatcgagaaaaac
gccaagtacgccaagctggacgtgtaa
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integrated database retrieval system
