KEGG   Hymenobacter sp. APR13: N008_21590
Entry
N008_21590        CDS       T03213                                 
Name
(GenBank) hypothetical protein
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
hym  Hymenobacter sp. APR13
Pathway
hym00010  Glycolysis / Gluconeogenesis
hym00020  Citrate cycle (TCA cycle)
hym00260  Glycine, serine and threonine metabolism
hym00280  Valine, leucine and isoleucine degradation
hym00310  Lysine degradation
hym00380  Tryptophan metabolism
hym00620  Pyruvate metabolism
hym00630  Glyoxylate and dicarboxylate metabolism
hym00640  Propanoate metabolism
hym00670  One carbon pool by folate
hym00785  Lipoic acid metabolism
hym01100  Metabolic pathways
hym01110  Biosynthesis of secondary metabolites
hym01120  Microbial metabolism in diverse environments
hym01200  Carbon metabolism
hym01210  2-Oxocarboxylic acid metabolism
hym01240  Biosynthesis of cofactors
Module
hym_M00009  Citrate cycle (TCA cycle, Krebs cycle)
hym_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hym_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
hym_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:hym00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    N008_21590
   00020 Citrate cycle (TCA cycle)
    N008_21590
   00620 Pyruvate metabolism
    N008_21590
   00630 Glyoxylate and dicarboxylate metabolism
    N008_21590
   00640 Propanoate metabolism
    N008_21590
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    N008_21590
   00280 Valine, leucine and isoleucine degradation
    N008_21590
   00310 Lysine degradation
    N008_21590
   00380 Tryptophan metabolism
    N008_21590
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    N008_21590
   00670 One carbon pool by folate
    N008_21590
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hym04147]
    N008_21590
Enzymes [BR:hym01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     N008_21590
Exosome [BR:hym04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   N008_21590
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 FAD_binding_3 HI0933_like NAD_binding_8 GIDA AlaDh_PNT_C Thi4 Lys_Orn_oxgnase DAO Amino_oxidase 3HCDH_N
Other DBs
NCBI-ProteinID: AII54522
UniProt: A0A076I0N3
LinkDB
Position
pHA:complement(82589..84001)
AA seq 470 aa
MTSYDVLIIGSGPGGYIAAVRCGQLGLKTAIIEKYPTLGGTCLNVGCIPSKAVLESTELY
QKATHQFTEHGIDADNLRADLPRMMERKDQVVKKVCDGVVFLMKKNKVDVLHGVASFVDA
TTVLVEPSDGGSGEKQLLTAKNIIIATGSKPSTLPFITLDKERVITSTEALALRELPQHL
IIVGGGVIGLELGSVYARLGSKVSVVEYTDAIIPTMDRTLGKELLRSLKKQGLEFYLSHK
VTAVERTGDTVKLTAQGGPSAELQLEGDYCLVSVGRRPYTDGLNLAAAGVELDEKGRVKV
NEDLQTTVPGIWAIGDVVRGAMLAHKASDEGVYVAELIAGQAPEVNYLLIPGVVYTWPEV
AGVGYTEEQLKEQGKAYKVGSFPYSASGRALAGADTEGLVKVLTDAQTDEILGVHMIGAR
IADIIAEAVGIMHFRGAAEDVGLMSHAHPTYAEAFKEACLNAAGIGALNM
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgacctcctacgacgttctcattatcggctccggccccggcggctatatcgcggccgta
cgctgcgggcagctgggcctgaaaacggccatcatcgaaaagtaccccaccctgggcggc
acctgcctcaacgtgggctgcatccccagcaaggcggtactcgaatccaccgagctctac
cagaaagccactcaccagttcacggagcacggcattgatgccgataacctgcgtgccgac
ctgccccgcatgatggagcgcaaggaccaggtggtgaagaaagtgtgcgacggggtggtc
ttcctcatgaagaaaaacaaggtggacgtactccacggcgtagcctcgttcgtggatgcc
accaccgtgctggtagagcccagcgacgggggcagtggggaaaagcagctgctcacggcc
aaaaacatcatcattgccaccggctccaagcccagcaccctgcccttcatcaccctggat
aaggagcgtgtcatcaccagcaccgaggcgctggccctgcgcgagctgccccagcacctg
attattgtgggcggcggggttatcggcctggagctgggctcagtgtatgcgcggctgggt
agcaaggtgtccgtcgtggaatacactgacgccatcatccctaccatggaccgcaccctg
ggcaaggagctgctacgctccctcaagaagcagggtctggagttctacctctcgcacaag
gtgacggccgtggagcggaccggcgacacggtgaagctcacggcccagggcgggccatcg
gccgagctgcagctggaaggcgactactgcctggtatcagtgggccgccggccctacacc
gacgggctgaacctggccgcggccggcgtggagctggatgagaagggccgcgtgaaagtc
aacgaggacctgcagacgacggtgccgggcatctgggccatcggcgacgtggtgcgcggg
gccatgctggcccataaggcttccgatgaaggcgtgtacgtggctgagctcattgccggc
caggccccggaggtgaactacctgcttatcccgggtgtggtctatacctggcccgaagta
gctggtgtgggctacaccgaggagcagctcaaggagcagggcaaagcctataaggtgggt
tcctttccgtattccgcctccggccgggcgctggccggggctgacaccgaagggttggtg
aaggtgctcaccgacgcgcagaccgacgagattctgggcgtgcacatgatcggggcccgc
attgccgacatcattgccgaggccgtgggcatcatgcacttccggggcgcggccgaagac
gtgggcctgatgtcgcatgcccaccccacctacgccgaagccttcaaggaagcctgcctg
aacgcggccggcatcggggccctcaatatgtaa

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