Hymenobacter sp. NBH84: F1C16_02160
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Entry
F1C16_02160 CDS
T11815
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
Organism
hyme Hymenobacter sp. NBH84
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_16
nSTAND3
AAA_22
IstB_IS21
AAA_18
ATPase_2
RuvB_N
TniB
ResIII
AAA_3
AAA_7
AAA_14
Torsin
Zeta_toxin
UVR
PhoH
NBD_SMAX1
CLP1_P
bpMoxR
NACHT
AAA_24
AAA_25
DNA_pol3_delta2
DUF87
UPF0242
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
QNE38446
LinkDB
All DBs
Position
complement(512264..514870)
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AA seq
868 aa
AA seq
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MEAKFSNRVKEVISLSREEAIRLGHDYIGTEHLLLGMIREGEGTAIGLLKKLGVSVEELK
YALEQATRNTATQGTSITGSIPLTKQTEKVLKITYLEAKIFKSEIIGTEHLLLSILRDED
NISSQILSKFNVNYESVRDSLDYHGAASNNPTNGPEADDDDNDRLFGGGQGRGGSGAAPK
KGNEKSRTPVLDNFGRDLTKLAEEDKLDPIVGREKEIERVAQILSRRKKNNPILIGEPGV
GKTAIAEGLALRIIQKKVSRVLFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKSP
DVILFIDELHTIVGAGGASGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALAR
RFQMVMVDPTTPEETIEILHNIKDKYQDHHHVVYTDKAIEQCVKLSDRYMSDRFLPDKAI
DILDEAGARVHINNIVVPEDILKLEEQIENIKGEKNRVVKSQKYEEAAKLRDTEKKLIDQ
LEQAKKDWEEETKKKRYTVKEENVAEVIAMMTGIPVSRVAQNESAKLLNMGEELKGKVIG
QDKAIAQLVKAIQRTRVGLKDPKKPIGSFVFLGPTGVGKTELAKVLANYLFDKEESLVRI
DMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTEKIRRKPYSVVLLDEIEKAHPDVYNLLLQ
VLDDGILTDGLGRKVDFRNTIIIMTSNIGARDLADFGVGIGFGTKARTENLDEITKGTIT
NALRKTFSPEFLNRLDDVIVFNSLEKKDIHQIIDISLSKLLSRIQSLGYRVELTEAAKDF
VADKGYDPKYGARPLNRAIQKYIEDPIAEEILKAQIAHGDVITADYTEGAEELTFSVSKS
DEAPDLPSDERPEETPAPDDASDKKKDK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaaattctcaaaccgagtcaaggaagtgatttccctgagccgggaagaagcc
atccggctcggtcacgactatatcggaaccgaacatctattgctgggcatgattcgcgaa
ggggaaggcactgccattgggctgctcaagaaattgggtgtctcggtggaagagctaaag
tatgccctggaacaagctacccgtaatacggctacgcagggcacgagcattactggctct
atcccgctgacgaaacagactgaaaaagtcctaaaaatcacctatctggaggcgaaaatc
ttcaagagcgaaatcatcggcactgaacacttgctgctgtcgattttgcgcgatgaggac
aacatctcgtcccagattctcagcaaattcaacgtgaactacgaatctgtacgtgactcg
ctggactatcacggtgccgcgagcaacaaccccaccaacggccccgaagctgatgacgac
gacaacgaccgtctgtttggcggtggccagggccgtggcggctccggtgctgcccccaag
aaaggcaacgagaagtcgcgtacgcccgtgctcgacaattttggccgcgacctgaccaag
ctcgccgaggaagacaagctcgacccaattgtgggccgcgaaaaggaaattgagcgcgta
gcgcaaatcctgtcgcgccgcaagaagaacaacccgattctgatcggtgagcctggtgtt
ggcaaaacggccattgcggagggcttggctctgcgcatcatccagaagaaagtgtcgcgc
gtgctgttcaacaagcgcgtggtaacgctggatctggcgtcgctggtagcgggtaccaag
taccgcggacagtttgaggagcgcatgaaggccgtgatgaacgagctggaaaagtcgccc
gacgtaattctgttcattgacgagctgcacaccattgtaggtgccggtggagcttcgggc
tcgctggatgccagcaacatgttcaagccagctttggcccgtggcgagattcaatgcatc
ggtgctactaccctcgacgagtaccgccagtacatcgagaaggatggtgccctggcccgt
cgtttccagatggtgatggtagatcctaccacgcccgaggagaccatcgaaatcctgcac
aacatcaaggacaagtatcaggaccaccaccacgtggtgtacaccgataaggctattgag
cagtgcgtgaagctgtcggaccgctacatgtcggaccgtttcctacctgacaaggccatt
gatattctggacgaagccggtgcccgcgtgcacatcaacaacatcgtggtgcccgaggat
attctcaagctcgaagagcagattgagaatattaaaggtgagaaaaaccgcgtggtgaag
tcgcagaaatacgaggaagccgccaagcttcgcgacacggaaaagaagctgattgatcaa
cttgagcaggccaaaaaggactgggaagaggagaccaagaagaagcgttacaccgtgaaa
gaggagaacgtggccgaggttatcgctatgatgactggcatccccgtatcccgcgtggct
cagaacgaaagtgctaagctgctcaacatgggtgaggagctgaagggcaaagtaattggt
caggacaaggccattgctcagcttgtgaaagccatccagcgtacccgtgtaggcttgaaa
gatccgaagaagccaattggctcgttcgtgttcctcggcccaaccggggtaggtaagacc
gaactggcgaaggtgctagcgaactacctcttcgacaaagaagagtcgctggtgcgcatc
gacatgtcggaatacatggagaaattcagcgtatcgcgcctggtaggcgcgcctcccggt
tacgtaggttacgaagagggcggtcagctgacggagaaaatccgccgtaagccgtactcg
gttgtcctactcgacgagattgaaaaagcgcaccccgacgtatacaacctgctattgcag
gtactggacgacggtatcctgactgacggcttgggccgcaaggtggacttccggaacacc
atcatcattatgacctcgaacatcggggcacgtgatctggcggacttcggggtaggcatt
ggtttcggtacgaaagctcgtacggaaaacctggacgagattacgaaaggtaccatcacc
aacgccctgcgtaagacgttctcgcccgagtttcttaaccgtttggacgacgtgattgtc
ttcaactcgttagagaagaaagacatccatcagatcatcgacatttcgctctcgaagctg
ctgtcgcgcatccagtcgttgggctaccgtgtagagttgactgaggccgccaaggacttt
gtagccgacaaaggctatgatccgaagtacggtgctcgtccgctgaaccgggccatccag
aagtacattgaagatccgattgcagaggaaatcctgaaggcgcaaatcgcccacggtgac
gttatcacggctgactatacggaaggcgctgaagagctaaccttctccgtcagcaagagt
gacgaagctcctgacttgccaagcgacgagcgcccggaagaaactccggccccggacgac
gcttcggataagaagaaagacaagtaa
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