Hymenobacter sp. NBH84: F1C16_06505
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Entry
F1C16_06505 CDS
T11815
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
hyme Hymenobacter sp. NBH84
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
HHH
Auto_anti-p27
PRODH
Zn_ribbon_NUD
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-ProteinID:
QNE39234
LinkDB
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Position
complement(1568134..1570254)
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AA seq
706 aa
AA seq
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MPSIQEQIATLTARLHHLNYQYYQNDVSEVPDQEFDQMLAELAALEKAHPELALPNSPTQ
RVGGTITKQFPTALHRYPMLSLGNTYSEADLRDFDERVQRGLEGAEYAYVCELKFDGVAM
SLTYHNGQLTQGVTRGDGTRGDVVTSNVRTIKNLPLHLRHAGPTQPEEFEVRGEIFMPQP
VFAELNQEREANGEALLANPRNAASGALKLQDSALVAARRLRFFAYSYLSQGRDFPTHSA
ALEALRSWGLPVSDTWRKCHSLDEVLEFIHHWDKHRFTLPVATDGIVVKIDDLRQQELLG
YTAKSPRWAIAYKYPAEAGRTRLREIQYQVGRTGAVTPVALLDPVPLAGTIVKRASVHNA
NQIAALDLRLGDMVFVEKGGEIIPKITSVDLTARPADSQPIVYPTECPACGTPLIRPEGE
AHFRCPNDRGCPPQLKAKLEHFVSRKASDIDGLGAETVGRFFDLGLVTDAASLYDLPSKA
DELAQLERMGEKSVQRLIAGLEASKQVPFDRVLFGLGIRYVGETVAEKLAAHYRTVEALG
AATAEELAAVPEVGGVIAESVAAWFQEPQNREMVERLRAAGVQLALTGEAPKAQSDRLAG
QTFVLSGVFEQHSREELQQLIQQHGGKVTGSISKKLSYLVAGDKMGPAKREKATELKVPI
ISETDLLAMLPDAATLPDSEAEAAADSALDALAAPTLPQGGQGSLF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcattcaggaacagatagccaccctcacggcccgcctgcaccaccttaattat
cagtattaccagaacgacgtgtcggaagtgcccgaccaggagttcgaccagatgctggcg
gagctggcagctctggaaaaagcccaccccgagctggccctacccaactcgcctacccag
cgggtaggcggcaccatcaccaagcagtttcctactgccctgcaccgctaccccatgctc
agcctgggcaatacctactcggaggctgatttacgcgacttcgacgagcgggtgcagcgc
ggcctggaaggcgccgagtacgcctacgtgtgcgagctgaagttcgacggcgtggccatg
agcctgacgtaccacaacggccagctcacgcagggcgtcacgcgcggcgacggcacccgt
ggcgacgtggtgaccagcaacgtgcgcaccatcaaaaacctacctctgcacctgcgccac
gccggccccactcagcccgaggagtttgaggtgcgcggcgaaatctttatgcctcagccg
gtttttgcggagctgaaccaggagcgcgaagccaacggcgaggcgctcctggccaacccg
cgcaatgccgccagcggtgccctcaagctgcaagactcagcgctggtggcggcgcggcgg
ctgcgcttcttcgcgtacagctacctcagccagggccgcgacttccctacccacagcgcc
gccctggaagcactgcgctcctggggcctgcctgtgtcggacacgtggcgcaagtgccac
tcgttggacgaagtgttggagtttattcatcactgggacaagcaccgcttcaccctcccc
gtggctaccgatggcattgtggtgaagatagacgacctgcgccagcaggagctgctgggc
tacacggccaagagtccgcgctgggccattgcgtataagtacccggccgaggctggccgc
acccgcctgcgcgagatacaataccaggtaggccgcaccggcgccgtgacgcccgtagcc
ctactcgaccccgtgccgctggccggcaccatcgtgaagcgcgcctcggtgcacaacgcc
aaccagattgctgccctcgacctgcgcctgggcgacatggtatttgtggagaaaggcggc
gaaatcattcctaagattaccagcgtcgacctcacggctcggcccgccgacagccagccc
attgtctaccccacggagtgcccagcctgcggcacgccgctgattcggcccgagggcgag
gcgcacttccgctgccccaacgaccggggctgcccgccccagctgaaagccaagctggaa
cacttcgtgtcgcgcaaagcctcagatatcgatggtttgggtgccgaaaccgtgggccga
ttcttcgacctggggttggtgacggacgcggccagcttgtatgatctgcccagcaaggcc
gacgaactcgctcagttagagcgcatgggcgagaaatccgtacagcgcctgattgcgggc
ctggaagcaagcaagcaagtgccctttgatcgggtgctgtttggcctgggcattcgctac
gtaggcgaaacagtggctgagaagctggctgcgcactaccgcacggtggaggcgctaggc
gcggctacggccgaggagctggccgccgtgccggaggtaggcggtgtcattgccgaatcg
gtggcggcgtggtttcaggagccgcaaaaccgcgagatggtggagcggctgcgggcggca
ggggttcagttggccctcactggcgaggcgcccaaggcccagagcgaccggctggccgga
caaaccttcgtactgtcgggcgtgtttgagcagcacagccgcgaggagctgcaacagctt
attcagcagcacggcggcaaggtaacgggcagcattagcaagaagctgagctacttggtg
gccggcgacaagatgggtcctgccaagcgcgaaaaagctacggaattgaaggtgcccatc
atctccgaaaccgacctactggcgatgctcccggatgccgctaccctccccgactccgag
gccgaagccgccgccgattcggcgctggatgccctcgctgccccgaccctaccgcagggc
ggccaagggtcgttgttctga
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