Hymenobacter sp. NBH84: F1C16_18615
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Entry
F1C16_18615 CDS
T11815
Name
(GenBank) T9SS type A sorting domain-containing protein
Organism
hyme Hymenobacter sp. NBH84
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLIPPER
Cadherin_4
Big_9
Cadherin_5
Por_Secre_tail
CshA_repeat
PA14
Cadherin_3
Integrin_A_Ig_3
Motif
Other DBs
NCBI-ProteinID:
QNE41429
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All DBs
Position
4455047..4462183
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AA seq
2378 aa
AA seq
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MKTTLRFVILLLAWNCLGRTVAWAQTTTLNFADANYSGSWVNRAATSVPAGSTVTTVSSA
YSATGSGTSAGTSTNGSIADARYSLATEVRNSVTTLNWLINYPTGSNKTSSVTFTFNRPV
ANFKVQVQDIDKNDATGTTYIDQVVFAGANGATAVAPTVTSSSPTAATINPSNTATANTL
NLTSANDYVTASFGSPITSVTITYKNTTGATDPAAQGIGIDKMTWDRALPTANNITNASL
ASTANQTAISALSGTVDGGVISYTITRIPPVNQGVLYYNTTGTTYAAVAAGQTLTAAQAG
SLRFDPAETFAGGNVTFNYTSKDDANQTSAPATFTIPIQAIAVAGNCGVSYFDNTKSYSG
LSAEYFSGNFNDNLSYFANNTAKLSRVDATINFAASNSFGNLVSEGVTTAGSDANPDQFS
ARYRGSIYIGTAGTYSFDLNSDEASYMWIDGDALLATPDANTAIVNNGGSHTARTAPTKV
SVPLSVGLHNILIFYGEGTGNNSLVFSYFSGPGVTQGTVVPSSVLCAGKSNLPPMAVNVT
NTTIIPRNAAQRTISSLNATDADGNVASYKIVTLPTSGTLYYQDANGTYVAATAGQVLTV
AQAGSLRFKPDGTTVGNVTFTFSATDNSGMESNAAATYTISVSDVVVTAGNDSYEVPKNT
PVTGNVLLNDNDPNNTKLTATKLTDPAHGTVVVNANGTYTYTPTADYLGPDSFTYRITNE
AGQTATATVSLRVYDTGSACTSSTGQNLLTNFDFSQGNTGFSNDYNYISPTANAALTGGT
KGLNPEGNYAVDVNANTYHNAFRGYDYDNTNTDGTTKSTTPAAANKFLMINGSASIQRMY
AQTVTVQKNRYYTFSAYFNNLLPPGSNSAVPEVGFVINGSSVSSTLILNESPDRWVRYSS
VWYSGDNTTAVFEIRNVSTAAGGNDLGIDQLYFGTCNLPPVANNDLQTTLPNTAKTFSVT
ANDTDGDGGINVATVNLDPSSTTRQTTFTVANKGTFTVNNNGDVTFTPVTGFTGTVSIPY
TVQDVDGALSNPGTISVTVQSPPTDLTTTITASAANVDAGQTLTYTVTARNNGPSTATQV
VETLQLPAGLTDGGNTVTFTINGAASTAPTYNNTTGLVTFPTVASLNSGGSNTYGITVKA
PSAGPITATAGISAANTDINLANNAASVSTIINPRYDVTTTITGPTSVVIGNLATYTVTT
KNVATNGALSAAPNVLQTVTLPKNLVDVYVSNGGTYDAASGIVTFPVLASLPLGQTAVNT
ISFTAPATGFTAAATVVGSYTAAGTSNNVGDVATGNNTQNATATTVTPTTGTPATATTNQ
TGTVANLATTISTTTPSVAPGAIVTMKVDIVNNGPSAATNVVEQVSMLPGLTVSGLPAGA
SYDATTGVLTFGTIGSLASAATQSYSFQFTAPTAGYVLAAASVSSATTDPVAADNVASTK
VMVTPTTDVTTALAGPTSALAGQVVNYTVTTANTSGAPANGVVQTVRLPAGLADVTVTGG
GTYDATTGVVTFALGTLPSGSKLVNSVSFGAPSAGSYSPTANVSTTTPESNTANNRAAVT
TTITGSNDVAISVNGPVATPVFGAATYQVVTTNNGPNTAESVVPTLQLPAGLTIITLPAD
ATYNSATGLVTFATISNLANGASNVNSITVRMPEVAQLTGLAQATVAGTVVDRNLDNNRS
TFTTASTRESDKTADLSVTLTSSAATVTAGQPVTLTAVFSSNLNNQDPATNVVTRLSLPI
GLTGVTVSNGGTYNSATGLVTWPVIASLASPTTTTPSSFTYTVQLNAPGLTTLSATASIA
SDISDSNPANNAAAARINITAQTDVTTLVSGPAAVVPGSAVTYSVVTLNNGPSPAANVVQ
KVTLPTGVIASNITNGSQSGNVITFNTITSQAAGAAGAVTNTFTITAPTTAYSVMGNVTT
TSSESDATNNQRTTNTAILDLAPYAQNVVNAMQAPEGNTAGQITISPLAATDAETAASSL
TYAIDPASLPTAAQGVLYYSNGGTYVALPTTGTAIPLTAAQAATLKFDPAAGFTGNAFFS
YTAIDAASNISNAALYTIAVGKDINSYYRATPTKGGNNTPYQNNDVLTYLIDNNGARYVA
SGTTALVYDATTGALLAGASNGLPTTGLNTAIAGSSALTVDQLSAVGISLNQSTGQLFVS
DRTKLRSGTYSVSITTTDVNGGTNTVVETFSIGANPLPVELVAFAVQAVQQNAVLSWSTA
SEKNNAYFVVERSFDGFAFMAVGRVAGQGSTNQAHVYGLVDAKVPHTGTVYYRLRQVDQD
GTESLSPVRTVVFAGEVVAQAPTLYPNPTTTRTTLDLRGLATGSYQVSVVDMAGRTVASY
SVSGGLESSLDVQQLPVGTYVVLVQGTNERHVLRLVKQ
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaactttacggtttgttattctactcctggcttggaactgcttgggtaggacc
gtcgcgtgggcgcaaactactacactcaatttcgccgatgccaactacagtggtagctgg
gttaaccgcgctgctaccagcgtaccagctggctctacagttacgacggttagtagtgcg
tatagtgcaacaggaagcggaactagtgcaggaacatctacaaacggtagtattgctgac
gcaagatattctttggcaacggaagtgcgaaatagtgttacgacacttaattggttgatt
aattaccccacaggtagtaacaaaacatcatctgtcacttttaccttcaaccgaccagta
gccaattttaaggtacaagtgcaggatatcgataagaatgacgctactggaactacttat
atagatcaagtggtttttgcgggggctaatggtgcaactgccgttgcaccaacagtaacc
tcgtctagtccgacagcggcaactatcaatccctcaaatacagctacagcgaacacgctg
aatcttacttcagctaatgactatgttactgcttctttcggtagccctattactagtgta
acaattacatataagaacacaactggagcaactgatcccgctgcacaaggcattggcatt
gacaagatgacttgggaccgggcgttgcctactgctaacaatatcaccaatgcgtccctg
gccagcacagccaaccaaacggcaatcagcgctttaagcggtactgtcgatggcggcgtt
atcagctatacgattacccggattccgcccgtcaatcagggcgtgctgtattataatact
actggcactacctacgcggctgtggctgctggtcagacacttacagcagcgcaagctggt
agcctcagatttgaccctgctgaaaccttcgctggcggcaatgtaacgttcaactacacc
tccaaagacgacgctaaccagacctccgcaccggccacgtttactattccaattcaggcc
atagctgtggctggtaattgcggcgtttcctatttcgataataccaaatcgtacagtggc
ctatcggcagagtatttctctggtaacttcaacgacaacctgagctatttcgctaacaat
acggcgaagctctcccgcgtggatgctaccatcaacttcgctgccagcaatagcttcggc
aacctggtgagcgaaggtgtaacgaccgccggcagcgacgccaaccctgatcaattcagc
gcccgctaccgcggcagcatttacatcggcacggctggtacatacagcttcgacctgaac
tccgacgaggcctcctacatgtggattgacggtgatgcgctattggcgacacccgacgcg
aacacggccattgtgaacaatggcggcagccatactgcccgtacagcgcccacgaaagtg
agcgtgccgctgtcggtgggtctacacaatattctgattttctacggcgagggcaccggt
aacaatagcttagttttcagttacttctctggtcctggcgtaacgcagggtactgtggtg
cccagttccgtattgtgcgccggcaagtcgaatctgccgccgatggctgtcaacgttacc
aacacaactatcattccgcgcaacgctgcccagcggactatcagctctctgaacgccacc
gatgcggatggcaatgttgcctcatacaagattgtgacgctgcctacctcaggtacgctt
tactaccaggatgctaacggaacatacgtggctgctacggccgggcaggtgctaacggta
gctcaggccggtagcctacggtttaagcctgacggtaccaccgtgggaaacgtcacgttt
acattctctgccaccgataatagtggtatggagtctaacgccgccgctacctatacaatt
tcggtcagcgacgtggtagtgacggctggcaacgatagctacgaggtgcctaagaatacg
cccgtaactggcaacgtattattgaacgataacgacccgaacaacactaagctaactgcc
accaagctaactgatccggcgcacggtacggtagtcgttaacgcgaacggtacttacacc
tatacgcctaccgcggactacttgggaccagacagcttcacctaccgaattacgaatgag
gctggccagacagcgacggctacggtaagcttgcgtgtatatgacactggttcggcctgt
acatcctcgaccggccagaacctgctgaccaactttgacttctcccagggcaacaccggc
ttctccaacgactacaactatatctcgcccacggccaacgcggcacttactggcggtact
aaagggcttaacccagagggcaactatgcggtggacgtaaacgccaacacgtatcacaac
gcgttccgtgggtacgactacgacaacaccaacaccgatggtacgacgaagtcaaccacg
ccggccgcggccaataagtttctgatgattaacggttcggccagcatccagcgcatgtac
gcgcaaacggtgacggtgcagaaaaaccgctactatacgttctcggcctacttcaacaac
ttgctgccgccgggctcgaacagtgcagtaccggaagtagggttcgttattaatggctct
tccgtatcgagcacgttgatactaaacgagtctccggaccgctgggtgaggtattccagc
gtgtggtactccggcgacaatactacggccgtatttgaaattcgcaacgtatcgacggcc
gcgggcggcaacgacttgggtatcgaccagttgtactttggtacttgtaacttgccccca
gtcgccaacaacgacttacaaactacgctgcctaacacggccaaaactttctccgtcacg
gccaatgatacggacggagacggcggcatcaacgtggccactgtaaacctcgaccccagc
agcaccacccgtcagacaaccttcacggtggcaaataagggtacgttcacagtgaataat
aacggcgatgtaacgtttacaccagtgacaggtttcaccggtacagtatccattccctat
acggtgcaggacgtagatggtgctctgagcaaccctggcactatttccgtaacggtgcag
agcccccctaccgacctgaccacgactatcacagccagcgcagctaacgtagatgccggc
caaacgctgacgtacaccgtaacggctaggaataatggtccgagcacggccacacaggta
gtggaaaccttgcaactgcccgccgggctgaccgatggtggcaacacggttacgtttact
ataaacggcgcggctagcacagcgcctacctacaataacacgacaggtctggtgacgttc
cccacggtggcttcactgaactcgggtggtagcaatacctacggtatcacggtgaaagca
cccagcgccggccccatcacggccacggccggcatatcagccgccaacacagatatcaac
ctggccaacaacgcagccagcgtgagcacgattatcaacccgcgctacgacgtaacgact
accattactggccccaccagcgtggtaatcggtaacctggctacctacaccgtaaccacg
aaaaatgtggcaacgaatggtgccctgtcggctgcgcccaacgtactccaaactgtgacg
ctacccaaaaatctggtggacgtgtacgtgtctaatggcggcacctacgacgcggcttcc
ggcattgtcaccttcccggtactggcctccctacccctgggacaaacggctgtcaacacg
attagctttacggcaccagccactggcttcacggctgccgctactgtggtaggcagctat
accgccgcgggcactagcaacaacgtgggcgacgtggctacaggcaacaatacccaaaac
gctacggctaccaccgtgacacccaccactggtacgcccgctacggctaccaccaaccag
actggcacggtggccaacctggctaccaccatctctaccacgacaccgagcgtggcgccc
ggcgccatcgtgacgatgaaagtagatattgtgaacaacggccccagcgccgccaccaac
gtagtagagcaggtgagcatgctgcctggcctaacggtatcggggctgcctgccggcgct
agctacgacgcaactactggggtattaaccttcggtaccattggtagcttagccagcgcc
gctacccagagctactcgtttcagttcacggcccccacggctgggtacgtgctggctgct
gccagtgtaagcagcgccaccaccgaccctgtagccgctgacaacgtggcttcaaccaag
gtgatggtaaccccaaccaccgacgtgacaacagctttggctggtcccacctcggctctg
gccgggcaagtagtgaactacaccgtgacgacggccaacacaagcggtgcgcccgctaac
ggtgtcgtgcagaccgtgcgtctgccggctggccttgccgacgtgaccgttacgggcggc
ggcacctacgatgcaactaccggggtggttaccttcgcgctgggcacgctgcctagcggc
agtaagctggtaaactcagtatcgttcggtgcgccgagcgcgggctcctactcacctaca
gccaatgtgagcactaccacgccggaaagcaacacggctaacaaccgcgctgctgttacg
acgacaataaccggttccaacgatgtggctatcagtgtgaacggtccggttgctacgcct
gttttcggggcggctacttatcaggtagtaaccactaacaacgggcctaacacggccgaa
tcggtagtgccgacgctgcaattgccagctggcctgaccattattactctacctgctgat
gctacttacaatagtgccacggggttagtaactttcgctacgattagcaacttagccaat
ggcgccagcaacgtgaacagcatcacggtgcggatgccagaagtggcccagctgacgggc
ttggcccaggccacagtagcaggtacggtagtagaccgtaacctcgacaacaaccgctca
acgtttacgaccgcctctacccgcgagagcgacaaaacggcggacctaagtgtgacgctt
acgtcctcggcggctactgtcacagctggccagcccgtaacgctgaccgccgtattttcc
agcaacctcaacaaccaggatccggctaccaatgtggtaacgcgtttgagcttgcctatc
ggcttaactggagtaacagtatctaacggaggtacttataacagcgcaacgggcctagtg
acttggccagttatcgcctcgctggcttcgccgacgacgacaacccccagctcgttcacg
tacacggtgcagctgaatgccccgggtcttactaccctgtcggcaacagcctctattgcc
tcggatatatcggactcgaaccccgctaacaacgcggcggcagccagaatcaatatcacg
gcgcaaactgacgtgacaacactggtaagcggaccagcagcagtggtgccaggcagcgcg
gttacatactccgtggtaacgctgaataatggtccctcaccggccgccaacgtggtgcag
aaggtaacgctcccaacgggcgtaatagcctccaacatcaccaacggtagccagagtggg
aacgttattacattcaataccatcacctcgcaggccgctggcgcagctggggccgttacc
aatacgttcactatcacagcaccgactacggcttatagcgtgatgggtaacgtgacgacg
acttcctcggaaagcgacgcgaccaacaaccagcgaacaactaatacggctatcctcgac
ctggcgccttacgcccagaacgtggtaaacgctatgcaggcgcccgaaggcaataccgct
ggccagataactatctcgccgcttgccgctactgacgctgaaactgccgcctctagtctg
acctacgctatcgatccggcttctttgccgacggcggctcagggcgtgctgtactatagt
aatgggggtacctacgtggcattacccaccaccggcacggccatcccgctgacggccgcg
caggcagccactttgaagtttgacccagcggctggcttcaccggcaacgccttcttcagc
tatacagctattgacgcggccagcaacatctcgaatgcggcgttgtataccattgcggtg
ggcaaagacatcaactcttattacagggcaacgcccaccaaaggaggcaataacactccg
tatcagaataacgatgtgctgacgtaccttatcgacaataatggagcacgatatgttgct
tcgggtactacagccttagtatacgatgccactacgggtgccctgctcgcgggagccagc
aacggtttgcctaccacaggtctcaatacagctattgctggttcttcggcgctaactgtt
gaccaactatcggctgtaggtatcagcctaaaccaatctactggccagctattcgtatca
gatcgtactaagttgcggtccggtacgtactcggtgagcatcaccactacggacgtgaat
ggtggtaccaacaccgtagtagaaacattcagtattggtgcgaacccgctgccagttgag
ctggtagccttcgcggtgcaggcagtgcagcagaacgcagtactgagctggagcacggct
tcggagaagaacaacgcctatttcgtagtagagcgctctttcgatggctttgccttcatg
gcggtaggccgggtagccgggcagggtagcaccaaccaggcgcacgtgtacgggctggta
gatgccaaggtgccgcacactggcacggtatactaccgcctgcggcaggtagaccaggac
ggcacggagtcgctgtcgccggtacgcacggtggtgttcgcgggtgaggtagtggcgcaa
gccccaacgctgtatcccaacccaaccaccacgcgcaccacgctggacctacgcggtctg
gcaactggtagctaccaagtaagcgtggtagacatggctggccgtacggtggctagctac
tcggtaagcggtggcctggagtcgtcgctggatgtgcagcaactgcccgtgggtacgtac
gtggtgctggtgcaaggcaccaacgagcgccacgtgctgcgcctcgtgaagcaataa
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