Hydrogenophaga sp. BPS33: F9K07_00970
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Entry
F9K07_00970 CDS
T06379
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn03030
DNA replication
hyn03430
Mismatch repair
hyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F9K07_00970
03430 Mismatch repair
F9K07_00970
03440 Homologous recombination
F9K07_00970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyn03032
]
F9K07_00970
03400 DNA repair and recombination proteins [BR:
hyn03400
]
F9K07_00970
Enzymes [BR:
hyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F9K07_00970
DNA replication proteins [BR:
hyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F9K07_00970
DNA repair and recombination proteins [BR:
hyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F9K07_00970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QHE83549
LinkDB
All DBs
Position
204921..205547
Genome browser
AA seq
208 aa
AA seq
DB search
MPMTRIAVIDFETTGISPGQGDRATEVAIVITEQGRVVDRYQSLMNAGVRIPSFITQLTG
ITNAMVQAAPSADTVMREAARFVGEVPMVAHNAAFDRRFWEAELGRAQVAAPQPFACTVL
LSRRLYPEAASHKLGSLVNLFRLPRTGQAHRALADAEMAAELLGRIQHDLRTRHGVHEPD
HAFLMALQRCTRAAVPKFIQSQTTRSLN
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatgacccgcattgcagtgatcgacttcgaaaccaccggcatctcgcccggccag
ggtgaccgcgccaccgaggtggcgatcgtgatcaccgagcaagggcgcgtggtggaccgg
taccagagcctcatgaacgcgggcgtgcgcatcccgtccttcatcacgcagctcaccggc
atcaccaacgccatggtgcaagctgcgccatcggcggatacggtgatgcgcgaagccgcg
cgcttcgtgggggaggtgcccatggtggcgcacaacgccgccttcgaccgccgcttctgg
gaagccgagctcgggcgcgcgcaggtggctgcaccccagcctttcgcctgtaccgtgttg
ctctcgcgccggctctatcccgaagccgcgagccacaagctgggttcgctcgtgaacctg
ttccggctgccgcgcacgggccaggcccaccgcgcgctggccgatgcggagatggcggcc
gaactgctcggccgcatccagcacgatctgcgcacccgccacggcgtgcacgaacccgac
cacgccttcctcatggccctgcagcgctgcacgcgcgcggcggtgcccaagttcatccag
tctcagaccacgcgcagcttgaactga
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