Hydrogenophaga sp. BPS33: F9K07_01380
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Entry
F9K07_01380 CDS
T06379
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F9K07_01380 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyn03019
]
F9K07_01380 (recQ)
03400 DNA repair and recombination proteins [BR:
hyn03400
]
F9K07_01380 (recQ)
Enzymes [BR:
hyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F9K07_01380 (recQ)
Messenger RNA biogenesis [BR:
hyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F9K07_01380 (recQ)
DNA repair and recombination proteins [BR:
hyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F9K07_01380 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QHE83621
UniProt:
A0A6P1ISD1
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All DBs
Position
complement(291144..293057)
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AA seq
637 aa
AA seq
DB search
MSATIDIAPGSEILETSLGVLHEVFGYEAFRGPQADIVSHVGAGGDALVLMPTGGGKSLC
YQVPAIVRQRAGQGVTIVVSPLIALMHDQVGALTEAGVAAAFLNSSLSGEEAQRVERQML
RGEITLIYTAPERLTTPRFLALLDSLHERGKLSLFAIDEAHCVSQWGHDFRPEYRALVVL
HERFASVPRVALTATADHLTRADIVEHLQLQEARTFISSFDRPNIRYQLVEKKDATTQLM
RFIRDEHTSSGDEHDAGIVYCQSRRRVEEVAAMLCDAGLTALPYHAGLDAAVRQKHQDRF
LREEGLIMVATIAFGMGIDKPDVRFVAHLDMPKNIEGYYQETGRAGRDGEAANAWMAYGL
QDVVNQRRMIDESPAADEFKQVLRGKLDALLTLAEASDCRRVRLLSYFGEASRPCGNCDN
CLSPPELIDATESARKLLSCIYRVQQASGTAFGAGHIMDILRGKDTDKVKQYGHEKLSTF
GIGADLSETQWRALLRQLIAREAIEVHDAPYNTLHLAGAARDILKGQAEVRLRALADKAA
GSARSSRQRASRATAKDDGVPLSLSERECLEALKSWRAGVAREHNLPAFVIFHDATLRAI
AGRKPETLADLDGISGIGQKKREAYGADVLRVVSAFV
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaccatcgacatcgcacccggcagcgagattctggagaccagcctcggcgtg
ctgcacgaggtgttcggctacgaagcctttcgaggtccgcaggcggacatcgtgtcccac
gtgggcgctggcggcgacgcgctggtgctcatgcccacggggggtggcaagtcgctgtgt
taccaggtgcccgcgatcgtgcggcaacgcgctggccagggcgtgaccatcgtggtctct
cccttgatcgcgctgatgcacgaccaggtcggcgccctgaccgaagccggcgtcgccgcc
gccttcctcaactccagcctctccggcgaagaggcgcagcgggtcgagaggcagatgctg
cgcggcgagatcacgctgatttacacggcgcccgagcgcctgaccacgccgcgcttcctc
gcgctgctggactcgcttcacgaacgcggcaagctcagcctgttcgccatcgacgaggcc
cactgcgtgagccaatggggccacgactttcgccctgaataccgcgcgctggtcgtgctg
cacgagcgctttgccagcgtgccgcgcgtggcgctcaccgccaccgccgaccacctcacg
cgcgccgacatcgtcgagcatctgcagttgcaggaagcgcgcaccttcatcagcagcttc
gaccgccccaacatccgctaccagctggtggagaagaaggacgccaccacccagctgatg
cgcttcatccgcgacgagcacaccagcagcggcgacgagcacgacgccggcatcgtctat
tgccagtcgcgccggcgggtagaggaagtggcggcgatgctctgcgacgccggcctcacc
gccctgccctaccacgcgggactggacgcggccgtgcggcagaaacaccaagaccgcttt
ctgcgcgaagagggcctgatcatggtcgccaccatcgccttcggcatgggcatcgacaag
cccgacgtgcgcttcgtcgcgcacctggacatgcccaagaacatcgagggctactaccag
gaaaccggccgcgccgggcgcgacggcgaggccgccaatgcctggatggcctacggcctg
caagatgtggtgaaccagcgccgcatgatcgacgagagccccgcggccgacgaattcaag
caggtgctgcgcggcaaactggacgccctgctcacgctcgccgaagccagcgactgccgc
cgcgtgcgcctgttgtcctactttggcgaagccagccggccctgcggcaactgcgacaac
tgcctgagcccgcccgaactgatcgacgccaccgagtccgcgcgcaagctgctttcctgc
atctaccgcgtgcaacaagccagtggcacggcctttggcgcgggccacatcatggacatt
ctgcgcggcaaggacaccgacaaggtcaagcagtatggccacgaaaagctgtctacgttc
ggcatcggcgccgatctgtccgaaacccagtggcgcgcgctgctgcgccagctcatcgca
cgcgaggcgatcgaggtgcacgacgcgccgtacaacacgctgcacctggccggtgcggcg
cgggacatcctcaagggccaggccgaggtgcgcctcagggccctggccgacaaggccgcg
ggctcggcccgcagcagccgccaacgcgcctcgcgcgccacggccaaggacgatggtgtg
ccgctgagtctgtccgagcgcgaatgtctggaagcgctcaagtcctggcgggccggggtg
gcacgggaacacaacctgcccgccttcgtgatcttccacgacgcgaccctgcgcgccatt
gccggacgcaagcccgaaaccctggccgatctggacggcatttccggcatcggccagaaa
aagcgcgaggcctatggtgccgacgtgctcagggtggtgagtgctttcgtctga
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