Hydrogenophaga sp. BPS33: F9K07_09565
Help
Entry
F9K07_09565 CDS
T06379
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
F9K07_09565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyn03019
]
F9K07_09565
03009 Ribosome biogenesis [BR:
hyn03009
]
F9K07_09565
03036 Chromosome and associated proteins [BR:
hyn03036
]
F9K07_09565
Enzymes [BR:
hyn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
F9K07_09565
Messenger RNA biogenesis [BR:
hyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F9K07_09565
Ribosome biogenesis [BR:
hyn03009
]
Eukaryotic type
90S particles
RNase
F9K07_09565
Prokaryotic type
rRNA processing factors
F9K07_09565
Chromosome and associated proteins [BR:
hyn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
F9K07_09565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
RM44_endonuclase
dsrm
DND1_DSRM
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
QHE85115
LinkDB
All DBs
Position
2027081..2027836
Genome browser
AA seq
251 aa
AA seq
DB search
MSPELQALQKRLQHVFANPRLLERALTHRSFSADHNERLEFLGDSVLSLAVSGLLFEKLS
QLPEGDLSRVRANLVKQDTLFQIASGLGLSTGLRLGDGEKRSGGHKRPSILADALEALIG
AVYLDAGFEIAAALVHRLYSNIELNAQMSAMGKDAKTELQEWLQARKMKLPVYRVVATLG
EAHKQTFDVECTVTETGHSERGIGASRRAGEQAAAAAMFQHLIAALPPSKGASSVFPGSS
STTPTPGQPRR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcccgagcttcaggcgctgcagaagcgcctccaacatgtttttgccaatccccgg
ttgctcgaacgtgccctgacgcaccgcagcttctcggccgaccacaacgagcggctggag
tttctgggcgactctgtgctcagcttggcggtgtccggcctgttgttcgaaaaactgagc
cagttgcccgagggcgatttgtctcgggtgcgagcgaatctcgtcaagcaagacaccttg
ttccagatcgcttccggtttggggctttcgacgggactgcgcctgggcgatggggaaaag
cgttccggcggacacaagcggccctccatcctggccgacgcactggaggcgctgatcggg
gcggtgtacctcgacgccggatttgaaatcgcagcagccttggtgcaccggctatacagc
aacatcgaactcaatgcgcagatgagcgccatgggcaaggatgccaagaccgaattgcag
gagtggttgcaggcgcgcaaaatgaagttgccggtctaccgcgtggtggccacgctcggc
gaggcgcacaagcagacgtttgacgtcgagtgcaccgtcaccgagaccgggcacagcgaa
cgcggcatcggtgcgtcgcgtcgggctggtgagcaggctgccgctgccgccatgtttcaa
cacctcatcgcggcgctgccgccgtccaagggggcttccagcgtgttcccaggctcttct
tccacgaccccaacgcccggccagccacggcgctga
DBGET
integrated database retrieval system
