Hydrogenophaga sp. BPS33: F9K07_10295
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Entry
F9K07_10295 CDS
T06379
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn03030
DNA replication
hyn03410
Base excision repair
hyn03420
Nucleotide excision repair
hyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F9K07_10295 (polA)
03410 Base excision repair
F9K07_10295 (polA)
03420 Nucleotide excision repair
F9K07_10295 (polA)
03440 Homologous recombination
F9K07_10295 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyn03032
]
F9K07_10295 (polA)
03400 DNA repair and recombination proteins [BR:
hyn03400
]
F9K07_10295 (polA)
Enzymes [BR:
hyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F9K07_10295 (polA)
DNA replication proteins [BR:
hyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
F9K07_10295 (polA)
DNA repair and recombination proteins [BR:
hyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
F9K07_10295 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F9K07_10295 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QHE85254
UniProt:
A0A6P1IU59
LinkDB
All DBs
Position
2201828..2204647
Genome browser
AA seq
939 aa
AA seq
DB search
MPDAPTPAISADTKTLLLVDGSSYLYRAFFAGGEAMSTTLPDGTVLKTGAIRIMINMMQK
LRKDVRADYAACVFDAKGPTFRDALYPEYKATRTPMPDDLRAQIAPIHEVVKLLGWKVLD
VPGVEADDVIGTLAHVASQQGIDCIISSGDKDLSQLVNEHITVIDTMNDRKRDIAGVTAE
FGVPPSLMLDYQNLVGDQVDNVPGVPKVGPKTAVKWLLEYGSLAALVERAHEIKGVAGEN
LRNALDWLPKGRELLTIKTDCDLTEHIDGLPSLESITIRGQETEALKAFGETYGFKGLVK
SLSLHDVPPERIASAKTAEAGMPGLFDEPDLSGSAQRVSNLRYDTILTWPMFDDWLQRVQ
AAELVALDTETTSLDEMRAEIVGISFSVKPGEAAYIPLRHSGPDAPEQLPFDEVLARLKP
WLEDSGKAKLGQHIKYDRHVFANHGIEVQGYAHDTMLQSYVLEVHKPHGLASLAERHLGR
QGINYEDLCGKGAHQIPFAQVDVAKAAEYSCEDSDQTLDVHQALWPQLQADDKLRFIYEL
EIASSEALYRIERNGVLIDAPTLSRQSNELGQRIVALEQEAFEIAGQPFNLGSPKQLGEI
FFDKLGLPVIKKTATGARSTDEEVLEKLAEDYPLPAKILEHRSLSKLKGTYTDKLAQMAL
PRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPVGHLIASADYSQI
ELRIMAHISGDEALLRAFHEGLDVHRATAAEVFGLETAQVSSEQRRYAKVINFGLIYGMG
TFGLAKALGIDNTAAKNYIARYFERFEGVRRYMDETRQRAKEMGYVETVFGRRLVLPDIQ
NAKGAKLAALERQAINAPMQGTAADLIKLSMVAVQKALDDQRRGTKMIMQVHDELVFEVP
EGEVEWLRTEIPRQMAGVAALKVPLLAEVGMGPNWDKAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgccagacgcccccacccccgccatttccgccgacaccaagaccttgctgctggtcgac
ggctccagttacctgtaccgcgccttcttcgccggtggcgaagccatgagcaccaccttg
cccgatggcacggtgctgaaaaccggtgccatccgcatcatgatcaacatgatgcagaag
ctgcgcaaggatgtgcgcgccgattacgccgcctgcgtgttcgacgccaagggcccgacc
ttccgcgacgcgctgtacccggagtacaaggccacccgcacccccatgcccgacgacctg
cgcgcgcagatcgcgccgatccacgaagtggtgaagttgctgggctggaaggtgctggac
gtgcccggcgtcgaggccgacgacgtgatcggcacgctggcccacgtggcgtcgcagcag
ggcatcgactgcatcatctccagcggcgacaaggacctgagccagctcgtgaacgagcac
atcaccgtgatcgacacgatgaacgaccgcaagcgcgacattgccggtgtgacggccgag
tttggcgtgccgcccagcctgatgctggactaccagaacctcgtgggcgaccaggtggac
aacgtgcccggcgtgcccaaggtggggccgaagacggcggtgaagtggctgctggaatac
ggttcgctggccgcgctggtggagcgcgcgcacgagatcaagggggtggccggcgagaac
ctgcgcaacgcgctggactggctgcccaaagggcgcgaactgctcaccatcaagaccgac
tgcgatctgacggagcacatcgacggcctgccttcgctggaatccatcaccatccgaggc
caggagaccgaggcgctcaaggccttcggcgagacctacggtttcaagggactggtcaag
tcgctgtccctgcacgatgtgccgccggaacggatcgcatcggccaagaccgccgaggct
ggcatgcccggcttgttcgacgagccggacctgagcggcagcgcccagcgcgtgagcaac
ctgcggtacgacaccatcctgacctggccgatgttcgacgattggctgcagcgcgtgcag
gcggccgaactggtggcgctggacaccgaaaccacctcgctcgacgaaatgcgcgccgag
atcgtgggcatcagtttcagcgtgaagccgggcgaagcggcctacattccgctgcgccac
agcggccccgacgcgcccgagcaactgccgttcgacgaggtgctggccaggctcaagccc
tggctggaagactcgggcaaggccaagctcggccagcacatcaagtacgaccgccatgtg
ttcgccaaccacggcatcgaggtgcagggctacgcccacgacaccatgctgcagagctat
gtgctcgaagtgcacaagccgcacggcctggccagcctggccgagcgccacctcgggcgc
cagggcatcaattacgaagacctgtgcggcaagggcgcgcaccagattccgttcgcgcag
gtggacgtggccaaggccgccgagtactcgtgcgaagacagtgaccagacgctggacgtg
caccaggcgctgtggccccagttgcaggccgacgacaagctgcgcttcatctacgaactc
gagatcgccagcagcgaggcgctctaccgcatcgagcgcaacggcgtgctgatcgacgcg
cccacgctcagccgccagagcaacgagctgggccagcgcattgtggccctggagcaggaa
gcgttcgagatcgccggccagccgttcaacctgggcagccccaagcagctgggcgagatc
tttttcgacaagctgggcctgccggtgatcaagaaaaccgcgaccggcgcgcgcagcacc
gacgaagaggtgctggagaaactggccgaggactacccgctgcccgccaagatcctggag
caccgcagcctctccaagctcaagggcacctacaccgacaaactcgcgcagatggcgctg
ccgcgcaccgggcgcgtgcacacgcactacgcgcaggccgtggcggtgaccgggcgcctg
tcgagcaacgaccccaacctgcagaacatccccattcgcacacccgaggggcgccgtgtg
cgcgaggccttcgtggcaccggtcggccacctgatcgccagcgccgactactcgcagatc
gagctgcgcatcatggcccacatcagcggtgacgaagccctgctgcgcgcctttcacgag
ggcttggacgtgcaccgcgcgaccgccgccgaggtgtttggcctggagaccgcgcaggtc
agcagcgagcagcgccgttatgccaaggtgatcaactttggcctgatctacggcatgggc
acctttgggctggccaaggcgctgggcatcgacaacaccgcggccaagaactacatcgcg
cgctacttcgagcgtttcgaaggcgtgcgccgctacatggacgagacgcgccaacgcgcc
aaggagatgggttacgtcgagaccgtgttcgggaggcggctggtgctgcccgacatccag
aacgccaagggtgccaagctggccgcgctggagcggcaggccatcaacgccccgatgcag
ggcacggcggccgatctcatcaagctgagcatggtggcggtgcagaaggctctggacgac
caacgccgtggcacgaagatgatcatgcaggtgcacgacgaactggtgttcgaggtgccc
gagggcgaggtggagtggctgcgcacggaaatcccacgccagatggcgggcgtggccgcg
ctcaaggtgccgctgctggccgaggtcgggatgggcccgaactgggacaaggcgcactga
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