KEGG   Hydrogenophaga sp. BPS33: F9K07_10295
Entry
F9K07_10295       CDS       T06379                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
hyn  Hydrogenophaga sp. BPS33
Pathway
hyn03030  DNA replication
hyn03410  Base excision repair
hyn03420  Nucleotide excision repair
hyn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hyn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    F9K07_10295 (polA)
   03410 Base excision repair
    F9K07_10295 (polA)
   03420 Nucleotide excision repair
    F9K07_10295 (polA)
   03440 Homologous recombination
    F9K07_10295 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hyn03032]
    F9K07_10295 (polA)
   03400 DNA repair and recombination proteins [BR:hyn03400]
    F9K07_10295 (polA)
Enzymes [BR:hyn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     F9K07_10295 (polA)
DNA replication proteins [BR:hyn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     F9K07_10295 (polA)
DNA repair and recombination proteins [BR:hyn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     F9K07_10295 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     F9K07_10295 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: QHE85254
UniProt: A0A6P1IU59
LinkDB
Position
2201828..2204647
AA seq 939 aa
MPDAPTPAISADTKTLLLVDGSSYLYRAFFAGGEAMSTTLPDGTVLKTGAIRIMINMMQK
LRKDVRADYAACVFDAKGPTFRDALYPEYKATRTPMPDDLRAQIAPIHEVVKLLGWKVLD
VPGVEADDVIGTLAHVASQQGIDCIISSGDKDLSQLVNEHITVIDTMNDRKRDIAGVTAE
FGVPPSLMLDYQNLVGDQVDNVPGVPKVGPKTAVKWLLEYGSLAALVERAHEIKGVAGEN
LRNALDWLPKGRELLTIKTDCDLTEHIDGLPSLESITIRGQETEALKAFGETYGFKGLVK
SLSLHDVPPERIASAKTAEAGMPGLFDEPDLSGSAQRVSNLRYDTILTWPMFDDWLQRVQ
AAELVALDTETTSLDEMRAEIVGISFSVKPGEAAYIPLRHSGPDAPEQLPFDEVLARLKP
WLEDSGKAKLGQHIKYDRHVFANHGIEVQGYAHDTMLQSYVLEVHKPHGLASLAERHLGR
QGINYEDLCGKGAHQIPFAQVDVAKAAEYSCEDSDQTLDVHQALWPQLQADDKLRFIYEL
EIASSEALYRIERNGVLIDAPTLSRQSNELGQRIVALEQEAFEIAGQPFNLGSPKQLGEI
FFDKLGLPVIKKTATGARSTDEEVLEKLAEDYPLPAKILEHRSLSKLKGTYTDKLAQMAL
PRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPVGHLIASADYSQI
ELRIMAHISGDEALLRAFHEGLDVHRATAAEVFGLETAQVSSEQRRYAKVINFGLIYGMG
TFGLAKALGIDNTAAKNYIARYFERFEGVRRYMDETRQRAKEMGYVETVFGRRLVLPDIQ
NAKGAKLAALERQAINAPMQGTAADLIKLSMVAVQKALDDQRRGTKMIMQVHDELVFEVP
EGEVEWLRTEIPRQMAGVAALKVPLLAEVGMGPNWDKAH
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgccagacgcccccacccccgccatttccgccgacaccaagaccttgctgctggtcgac
ggctccagttacctgtaccgcgccttcttcgccggtggcgaagccatgagcaccaccttg
cccgatggcacggtgctgaaaaccggtgccatccgcatcatgatcaacatgatgcagaag
ctgcgcaaggatgtgcgcgccgattacgccgcctgcgtgttcgacgccaagggcccgacc
ttccgcgacgcgctgtacccggagtacaaggccacccgcacccccatgcccgacgacctg
cgcgcgcagatcgcgccgatccacgaagtggtgaagttgctgggctggaaggtgctggac
gtgcccggcgtcgaggccgacgacgtgatcggcacgctggcccacgtggcgtcgcagcag
ggcatcgactgcatcatctccagcggcgacaaggacctgagccagctcgtgaacgagcac
atcaccgtgatcgacacgatgaacgaccgcaagcgcgacattgccggtgtgacggccgag
tttggcgtgccgcccagcctgatgctggactaccagaacctcgtgggcgaccaggtggac
aacgtgcccggcgtgcccaaggtggggccgaagacggcggtgaagtggctgctggaatac
ggttcgctggccgcgctggtggagcgcgcgcacgagatcaagggggtggccggcgagaac
ctgcgcaacgcgctggactggctgcccaaagggcgcgaactgctcaccatcaagaccgac
tgcgatctgacggagcacatcgacggcctgccttcgctggaatccatcaccatccgaggc
caggagaccgaggcgctcaaggccttcggcgagacctacggtttcaagggactggtcaag
tcgctgtccctgcacgatgtgccgccggaacggatcgcatcggccaagaccgccgaggct
ggcatgcccggcttgttcgacgagccggacctgagcggcagcgcccagcgcgtgagcaac
ctgcggtacgacaccatcctgacctggccgatgttcgacgattggctgcagcgcgtgcag
gcggccgaactggtggcgctggacaccgaaaccacctcgctcgacgaaatgcgcgccgag
atcgtgggcatcagtttcagcgtgaagccgggcgaagcggcctacattccgctgcgccac
agcggccccgacgcgcccgagcaactgccgttcgacgaggtgctggccaggctcaagccc
tggctggaagactcgggcaaggccaagctcggccagcacatcaagtacgaccgccatgtg
ttcgccaaccacggcatcgaggtgcagggctacgcccacgacaccatgctgcagagctat
gtgctcgaagtgcacaagccgcacggcctggccagcctggccgagcgccacctcgggcgc
cagggcatcaattacgaagacctgtgcggcaagggcgcgcaccagattccgttcgcgcag
gtggacgtggccaaggccgccgagtactcgtgcgaagacagtgaccagacgctggacgtg
caccaggcgctgtggccccagttgcaggccgacgacaagctgcgcttcatctacgaactc
gagatcgccagcagcgaggcgctctaccgcatcgagcgcaacggcgtgctgatcgacgcg
cccacgctcagccgccagagcaacgagctgggccagcgcattgtggccctggagcaggaa
gcgttcgagatcgccggccagccgttcaacctgggcagccccaagcagctgggcgagatc
tttttcgacaagctgggcctgccggtgatcaagaaaaccgcgaccggcgcgcgcagcacc
gacgaagaggtgctggagaaactggccgaggactacccgctgcccgccaagatcctggag
caccgcagcctctccaagctcaagggcacctacaccgacaaactcgcgcagatggcgctg
ccgcgcaccgggcgcgtgcacacgcactacgcgcaggccgtggcggtgaccgggcgcctg
tcgagcaacgaccccaacctgcagaacatccccattcgcacacccgaggggcgccgtgtg
cgcgaggccttcgtggcaccggtcggccacctgatcgccagcgccgactactcgcagatc
gagctgcgcatcatggcccacatcagcggtgacgaagccctgctgcgcgcctttcacgag
ggcttggacgtgcaccgcgcgaccgccgccgaggtgtttggcctggagaccgcgcaggtc
agcagcgagcagcgccgttatgccaaggtgatcaactttggcctgatctacggcatgggc
acctttgggctggccaaggcgctgggcatcgacaacaccgcggccaagaactacatcgcg
cgctacttcgagcgtttcgaaggcgtgcgccgctacatggacgagacgcgccaacgcgcc
aaggagatgggttacgtcgagaccgtgttcgggaggcggctggtgctgcccgacatccag
aacgccaagggtgccaagctggccgcgctggagcggcaggccatcaacgccccgatgcag
ggcacggcggccgatctcatcaagctgagcatggtggcggtgcagaaggctctggacgac
caacgccgtggcacgaagatgatcatgcaggtgcacgacgaactggtgttcgaggtgccc
gagggcgaggtggagtggctgcgcacggaaatcccacgccagatggcgggcgtggccgcg
ctcaaggtgccgctgctggccgaggtcgggatgggcccgaactgggacaaggcgcactga

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