Hydrogenophaga sp. BPS33: F9K07_13035
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Entry
F9K07_13035 CDS
T06379
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hyn
Hydrogenophaga sp. BPS33
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyn03009
]
F9K07_13035 (rimO)
Enzymes [BR:
hyn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
F9K07_13035 (rimO)
Ribosome biogenesis [BR:
hyn03009
]
Prokaryotic type
ribosomal protein modification factors
F9K07_13035 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QHE85763
UniProt:
A0A6P1IT85
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Position
2796494..2797894
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AA seq
466 aa
AA seq
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MNSNTYDVATTSGITAVPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFAGADLVIV
NTCGFIDDAVRESLDTIGEALAENGKVIVTGCLGAREGEGGGNLVQQMHPSVLAVTGPHA
THEVMSAVHQHLPKPHDPFVDLVPPQGIKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDL
VSRPIGDVLTEARKLFEAGVKELLVVSQDTSAYGVDVKYRTGFWDGKPVKTRMFDLVRSL
GEIAKGYGAWVRLHYVYPYPHVDEIIPLMAEGLCLPYLDVPLQHSHPDVLRRMKRPASGE
RNLERIARWRELCPQIVVRSTFIAGFPGETDAEFDHLLDFVREARIDRAGCFAYSPVPGA
TANELPDAVPDALREERRARFMAVAEAASAEKLQQRVGAIMQVLVDSAPGLGKKGGIGRS
YADAPEIDGVVRLLPPEKISKTLKVGEFTKARVVAAQGHDLLAVPI
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaatacttacgacgtagccacgacgtcagggatcaccgctgttcccaaggtg
ggcttcgtcagcctgggctgccccaaagccctgaccgactccgagctgatcctcacgcag
ctcagcgctgagggataccagacctccaagacctttgccggggccgacctggtgatcgtc
aacacctgcggcttcatcgacgacgcggtgcgcgaaagtctggacaccattggtgaggca
ttggccgaaaacggcaaggtcatcgtcaccggttgcctgggcgcgcgcgaaggcgagggc
ggcggcaacctggtgcaacagatgcatccgagcgtgctggccgtgaccggcccgcacgcc
acgcacgaggtgatgagcgcggtgcaccagcacctgcccaagccgcacgaccccttcgtg
gatctcgtgccgccccagggcatcaagctcacgcccaagcactacgcctacctcaagatc
agcgagggctgcaaccaccgctgcaccttttgcatcatcccttccatgcgcggtgatctg
gtgagccgccccattggcgacgtgctgaccgaagcgcgcaagctgttcgaggccggtgtg
aaggaattgttggtggtgagccaggacacctcggcctacggggtggacgtgaagtaccgc
accggtttctgggacggcaagccggtgaagacgcgcatgttcgacctggtgcgctcgctc
ggcgaaatcgccaagggttacggtgcctgggtgcgcctgcactatgtgtatccgtacccg
cacgtggacgagatcattccgctgatggccgagggcctgtgcctgccgtacctggacgtg
cccctgcagcacagccaccccgatgtgctgcgccgcatgaagcgcccggccagcggcgag
cgcaacctggagcgcatcgcgcgctggcgcgagctgtgcccacagatcgtggtgcgcagc
accttcatcgccgggttccccggtgagacggacgccgagttcgatcacctgctggacttc
gtgcgcgaagcccgcatcgaccgcgccggctgcttcgcttactcgccggtgccgggcgcc
acggccaacgaactgcctgacgcggtgcccgatgcgctgcgcgaggagcgccgcgcgcgc
ttcatggcggtggccgaggcggcatcggccgagaagctgcagcagcgcgtgggcgcgatc
atgcaggtgctggtggattcggcacccggtctgggcaagaagggcggtatcggccgcagc
tacgccgatgcaccggagatcgacggcgtggtgcgcctgttgccgcccgagaagatcagc
aagaccctgaaggtgggcgagttcaccaaggcgcgtgtggtcgccgcccaagggcacgac
ctgctggctgtgccgatctga
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