Hydrogenophaga sp. BPS33: F9K07_13235
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Entry
F9K07_13235 CDS
T06379
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn00010
Glycolysis / Gluconeogenesis
hyn00020
Citrate cycle (TCA cycle)
hyn00260
Glycine, serine and threonine metabolism
hyn00280
Valine, leucine and isoleucine degradation
hyn00310
Lysine degradation
hyn00380
Tryptophan metabolism
hyn00620
Pyruvate metabolism
hyn00630
Glyoxylate and dicarboxylate metabolism
hyn00640
Propanoate metabolism
hyn00670
One carbon pool by folate
hyn00785
Lipoic acid metabolism
hyn01100
Metabolic pathways
hyn01110
Biosynthesis of secondary metabolites
hyn01120
Microbial metabolism in diverse environments
hyn01200
Carbon metabolism
hyn01210
2-Oxocarboxylic acid metabolism
hyn01240
Biosynthesis of cofactors
Module
hyn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hyn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hyn_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
hyn_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
F9K07_13235 (lpdA)
00020 Citrate cycle (TCA cycle)
F9K07_13235 (lpdA)
00620 Pyruvate metabolism
F9K07_13235 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
F9K07_13235 (lpdA)
00640 Propanoate metabolism
F9K07_13235 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
F9K07_13235 (lpdA)
00280 Valine, leucine and isoleucine degradation
F9K07_13235 (lpdA)
00310 Lysine degradation
F9K07_13235 (lpdA)
00380 Tryptophan metabolism
F9K07_13235 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
F9K07_13235 (lpdA)
00670 One carbon pool by folate
F9K07_13235 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hyn04147
]
F9K07_13235 (lpdA)
Enzymes [BR:
hyn01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
F9K07_13235 (lpdA)
Exosome [BR:
hyn04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
F9K07_13235 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
GIDA
FAD_binding_2
Biotin_lipoyl_2
Thi4
AlaDh_PNT_C
NAD_binding_8
FAD_binding_3
HI0933_like
DEC-1_N
DAO
GCV_H
HlyD_D23
HlyD_3
RnfC_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QHE85798
UniProt:
A0A6P1J1Y9
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All DBs
Position
2843659..2845512
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AA seq
617 aa
AA seq
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MATIDIQVPDIGDFDEVSVIELLVKAGDTVKAEQSLITVESDKASMEIPSSQGGVVKELK
VKLGDKVKQGSVVLTLEAEGAGAAAAAPAAPTAAAAPVPPPQPAPSGGGSPAPAPTAASF
AGSADLECDVLVLGGGPGGYSAAFRAADLGLKVVLVERYATLGGVCLNVGCIPSKALLHV
AAVMDEVSHMADLGVEFGRPVVNIEKLRGHKEKVIGKLTGGLAAMAKMRKVTTVRGVGSF
VGANHLEVEETNGAKGQEKTGKKQVIAFKKAIIAAGSQAVRLPFMPDDPRVVDSTGALEL
KEVPKRMLILGGGIIGLEMGTVYSTLGARLDVVEMLDGLMQGADRDLVKIWQKMNAKRFD
NIMLKTKTVGAKATPAGIEVTFAAAEEGGKAPEPQTYDLVLQAVGRTPNGKKIGAEKAGV
AVSDRGFINVDIQMRTNVPNIFAIGDIVGQPMLAHKAVHEAHVAAEVIAGELQGNQELAS
AAFNARVIPSVAYTDPEVAWVGLTEDQAKAQGIKVKKGLFPWTASGRAIANGRDEGVTKL
LFDDSPEAHGHGRILGGGMVGTHAGDMIGEIALAIEMGADAVDIGKTIHPHPTLGESIGM
AAEIAHGSCTDVPPQRK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatcgacattcaagttcccgatatcggtgattttgacgaagtgtctgtgatt
gagttgctggtgaaagccggtgacacggtcaaggcagagcaaagcctgatcacggtggag
tccgacaaggcctccatggagataccatcgtcgcaaggtggtgtggtcaaggagctcaag
gtcaagctgggcgacaaggtcaagcagggcagtgtggtgctcacgctggaggccgagggt
gcgggcgcggctgcggcggcacctgccgcgccgacggccgctgcggctcccgtaccccca
ccccaacccgcccccagcgggggagggagccctgcgcccgcgccgaccgccgccagcttc
gccggcagtgccgacctcgaatgcgacgtgctcgtgctcggtggcggcccgggcggttac
agcgcggccttccgcgcggccgacctggggctcaaggtcgtgctggtggagcgctacgcc
acgctgggcggcgtctgcctcaacgtgggctgcatcccttccaaggcgctgctgcacgtg
gccgcggtgatggacgaggtgagccacatggccgatctgggtgtcgaattcggccgaccg
gtggtcaacatcgagaagctgcgcggccacaaggaaaaggtcatcggcaaactcaccggc
gggctggcggcgatggccaagatgcgcaaggtcaccaccgtgcgcggcgtgggcagcttt
gtcggagccaaccacctcgaagtggaggaaaccaacggtgccaaaggccaggagaaaacc
ggcaagaagcaggtcatcgccttcaagaaagccatcattgccgccggctcgcaagccgtg
cgcctgcccttcatgcccgacgatccccgcgtggtcgacagcaccggcgcgctcgaactc
aaggaagtgcccaagcgcatgctgatcctgggtggcggcatcatcggcttggaaatgggc
acggtgtacagcacgctgggcgcgcgcctggacgtggtggaaatgctcgatggcctgatg
cagggcgccgaccgtgacctggtgaagatctggcagaagatgaacgccaagcgcttcgac
aacatcatgttgaagaccaagacggtgggcgcgaaggccacgccggcgggcatcgaagtg
acgtttgccgccgccgaagagggcggcaaggcgcccgaaccacagacctacgacctcgtg
ctgcaggccgtgggccgcacgcccaacggcaagaagatcggcgcggagaaggccggtgtg
gcggtgtcggaccgtggcttcatcaacgtcgacatccagatgcgcaccaacgtgccgaac
atcttcgccatcggcgacatcgtgggccagccgatgctggcgcacaaggcggtgcacgag
gcgcacgtggccgccgaggtgatcgctggcgaactgcaaggcaaccaggagctggccagc
gcggcgttcaacgcgcgggtgatccccagcgtggcctacaccgatccggaagtggcctgg
gtgggcttgaccgaggaccaggccaaggcgcaaggcatcaaggtgaagaagggcttgttc
ccctggacggcgtcggggcgtgccattgccaacgggcgcgacgagggcgtgaccaagctg
ctgttcgacgactcgcccgaggcccacgggcacggccggatcctggggggtggcatggtg
ggcacgcacgcgggcgacatgatcggcgagatcgccctggccatcgagatgggcgcggac
gcggtggacattggcaagaccatccacccgcaccccacgctgggcgagagcatcggcatg
gccgccgagatcgcccacggctcctgcaccgacgtgccgcctcagcgcaagtag
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