Hydrogenophaga sp. BPS33: F9K07_15425
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Entry
F9K07_15425 CDS
T06379
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hyn
Hydrogenophaga sp. BPS33
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyn03016
]
F9K07_15425 (truB)
Enzymes [BR:
hyn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F9K07_15425 (truB)
Transfer RNA biogenesis [BR:
hyn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F9K07_15425 (truB)
Prokaryotic type
F9K07_15425 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QHE86196
UniProt:
A0A6P1IYU3
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All DBs
Position
complement(3342665..3343657)
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AA seq
330 aa
AA seq
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MHAPRTRVQRRPVHGVLLLDKPLGLSSNQALQKAKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLHLDANKTYETTVRLGVKTRTADAEGDVLETRPVNCSVGQVVEVLDRFTGP
IAQVPPMHSALKKDGKALYEYAREGETVEREARNVVIHELELLDLQLQGDAPHVRLRVRC
SKGTYIRTLGEDIGEALGCGGHLSMLRRTATGPFEVSQCITLDALEALGENDRIERLLPV
QALLDGHDAVTLGADDAGRFLSGMRRCGDWADSARVAVFGPVPHGAHDPPASPPVLLGSA
RTVAGELIPGRLLSPTEIQQILETSPELAS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgccacgcacacgggtgcaacggcgccctgtgcatggggtgttgttgctcgac
aagccgctgggactctccagcaaccaggccctgcagaaggccaagtggttgctgcgcgcg
gagaaggcgggccacaccggcacgctcgatccgctggccaccggcgtgctgccgctgtgt
tttggcgcggccacgaagttcagccagttgcacctggatgcgaacaagacctacgaaacc
accgtccgcctgggggtgaagacccgcaccgccgatgccgaaggcgatgtccttgaaacc
cgccctgtgaattgcagtgtgggccaggtggtcgaggtgctcgaccgcttcacgggtccg
atcgcccaggtgccgcccatgcacagcgccttgaagaaggacggcaaggcgctctacgaa
tatgcgcgcgagggtgaaacggtggagcgcgaggcgcgcaacgtcgtcatccacgaactg
gagttgctcgacctgcaattgcagggcgacgcgccgcatgtgcggcttcgggtgcgttgc
agcaaggggacctacatccgcacgctgggcgaggacatcggcgaagccctgggttgcggc
ggccatctctccatgctgcgccgtaccgccaccggcccgttcgaggtgtcgcaatgcatc
accctcgacgcgctcgaagccctgggtgaaaacgatcgcatcgaacggttgttgcccgtg
caggcactgctggacggtcacgacgctgtcacgctcggtgccgacgatgccgggcggttt
ctcagcggcatgcgacgctgcggcgattgggcggacagcgcgcgcgtggcggtgtttggc
ccggtcccgcacggcgcccacgacccacccgcatcgccgcccgtgctgctcggcagcgcg
cgcaccgtggcaggtgaactcatcccggggcggctgctgagccccaccgaaatacagcaa
atcctggaaacctcaccggaactcgcatcatga
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