Hydrogenophaga sp. BPS33: F9K07_16290
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Entry
F9K07_16290 CDS
T06379
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn03030
DNA replication
hyn03430
Mismatch repair
hyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F9K07_16290
03430 Mismatch repair
F9K07_16290
03440 Homologous recombination
F9K07_16290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyn03032
]
F9K07_16290
03400 DNA repair and recombination proteins [BR:
hyn03400
]
F9K07_16290
Enzymes [BR:
hyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F9K07_16290
DNA replication proteins [BR:
hyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F9K07_16290
DNA repair and recombination proteins [BR:
hyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F9K07_16290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_14
AAA_18
AAA_19
Rad17
DUF3646
AAA_5
Adeno_E1B_55K_N
Herpes_Helicase
nSTAND3
AAA_16
SKI
AAA_2
AAA_28
TsaE
Motif
Other DBs
NCBI-ProteinID:
QHE86352
UniProt:
A0A6P1IVB3
LinkDB
All DBs
Position
complement(3513829..3515799)
Genome browser
AA seq
656 aa
AA seq
DB search
MSYVVLARKYRPRTFTEMVGQGHVVQALSNALTTQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCLGADGQGGITAEPCGVCQACTDIDSGRFVDYTELDAASNRGVDEVQALLEQAVYKP
VQGRVKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVLEHLQQVLQAENVPADVQALRLLSRAARGSMRDALSLTDQAIAFGGGQLQEA
GVRQMLGAVDRSYVLRLIDALARADGAAVVDTVDALRLNGLNAASTLEEMTGVLQRMAVL
QAVPERAQATDGLEDPDEAQIAQLAQSLPADETQLLYSLCLHGRAELGLAPDEYAALTMV
LLRLMAFKPAGVATSATAEKKTLKTAEPASAVVPATMPAAVRAAVLPAAAPVSTPAAAPT
PTPATDPALVTLPVRAPHAVAARPVSAPVAPAAVVHPKASSEPPEDDAPWPDDDGPPWEE
EAAPASSTVRRVMAIPVVDAGEPSPLDQPQARAEPGTQTVLPAAPGGSVEGDFWFETVMQ
LVRAEAVTALVRELGLQSQLVARDTDQWMLRVERMSLNQGNTRERFAAALQTIGHHVRLT
VEIGPVTDSPAMRVAAAAARRQREAEAQILADPFVQTMMRDFGGRIVPGTLKAITA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatgtcgttctggcccgcaaataccgcccgcgcaccttcaccgaaatggtgggg
cagggtcacgtggtgcaggcactctcgaacgcattgaccacccagcgactgcaccacgcc
tacctgttcaccggcacgcgcggcgtgggcaagaccaccgtctcgcgcatcctggccaag
tcgctcaactgcctcggcgcggacgggcagggcggcatcaccgccgaaccgtgtggcgtg
tgccaggcctgcaccgacatcgacagcggccgcttcgtcgactacaccgaactcgacgcc
gcctccaaccgcggcgtggacgaggtgcaggcgctgctcgaacaggcggtctacaagccc
gtgcaaggccgcgtcaaggtcttcatgatcgacgaggtgcacatgctgaccaacacggcg
ttcaacgccatgttgaagacgctggaagagccgcccgaatacctcaagttcgtgctggcc
acgaccgatccgcagaaggtgccggtgaccgtgctctcgcgctgtctgcagttcaacctg
cgcccgatggcgcccgagacggtgctggaacacctgcagcaggtgctgcaggccgaaaac
gtgccggccgatgtgcaggcactgcgcctgttgtcgcgcgccgcgcgcggttcgatgcgc
gacgcgctctcgctgaccgaccaggccatcgcgtttggcggcggccagttgcaggaagcc
ggggtgcgccagatgttgggcgcggtggaccgctcgtatgtgctgcgcctgatcgatgcc
ctggcccgtgccgatggcgctgccgtggtggacaccgtcgacgccttgcgcctcaacggc
ctgaacgcggcctccacgctggaggaaatgaccggcgtgctgcagcgcatggcggtgttg
caggccgtgcccgagcgcgcgcaggccaccgatgggttggaggatccggacgaggcgcag
atcgcgcaactcgcacaaagcctgcctgccgacgaaacgcaattgctctacagcctgtgc
ctgcatggccgcgccgagctgggtctggcacccgacgagtacgccgcgctcaccatggtg
ctgttgcggctcatggccttcaaacccgccggcgtcgccaccagcgcaacagcggaaaaa
aaaacactgaaaacggctgaaccggcctcggccgtggttccggcgaccatgcctgcggcg
gttcgcgccgctgtgctaccggcagctgcgcctgtgtcgacgccggcggccgcgccgaca
cccacccccgccaccgatcccgccctggtgaccttgcccgtgcgcgcgccccatgcggtt
gccgcgcgcccagtctcagcacccgtggctcccgctgcggtggttcaccccaaagcatct
tcagagccaccggaagacgacgcaccctggcccgacgacgacggcccgccatgggaagaa
gaagccgcgccggcctccagcacggtgcgccgcgtgatggcgattcccgtggtcgatgcc
ggagagcctagcccgctggaccaaccccaggcgcgcgccgagcctggcacgcaaacggtg
ttgccggccgcgccgggggggagtgtcgaaggcgatttctggttcgagaccgtcatgcaa
ctcgtgcgcgccgaggccgtcaccgcgctggtgcgcgagcttggcctgcagtcgcaactg
gtggcgcgcgataccgatcaatggatgctgcgcgtcgagcgcatgtcgctcaaccagggc
aatacccgcgagcgctttgccgcggccttgcagacgatcgggcaccatgtgcgtttgacg
gtcgagatcggccctgtcaccgactcaccggccatgcgcgtggccgccgccgccgcacgc
cggcagcgcgaggccgaggcgcagatcctggccgacccgttcgtgcagacgatgatgcgc
gactttggcggcagaatcgtgcccggtacgctcaaggccatcaccgcctga
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