Hydrogenophaga sp. BPS33: F9K07_16340
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Entry
F9K07_16340 CDS
T06379
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hyn
Hydrogenophaga sp. BPS33
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyn03400
]
F9K07_16340
Enzymes [BR:
hyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F9K07_16340
DNA repair and recombination proteins [BR:
hyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
F9K07_16340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QHE86361
UniProt:
A0A6P1J121
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All DBs
Position
complement(3525856..3528483)
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AA seq
875 aa
AA seq
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MTHVSPIGAATTPAPDPGHPSVRHWAAGIAHIDAAARERALPAGRVVVLVPYAQLMDAGR
RAWAAAHPSGFAPRFESTRNWAASLRPFLPGPGDLSMDMARDSLMAAALIERVAPARADA
ALRTVMVGRLVDAARQLAPWAAAVPPEHRLAWAEPLRAAMAPTTSALHWEGLLATLALTW
VSTSAYATDVLWAPMAQPGAHADLLVVLQGFQDDPLATALAARWGDRALVLPLGESDWRA
GEDRRLHACGDAEDEAQRAAACVIEHINQGRTPVALVANDRLLTRRVSAMLHRAGISVRD
ETGWKLSTTRAAAQLMSVLRAADARAAMDDVLDLLKQATAWPDAQGQQLEQLAREFGVSR
WKAAVQHARLAPAIPQGLPAWIEGLQAARPLTVWLGDLALALKACGLWTSFETDPAGQQL
LQALRLGDGAAMELAGVAQAVDAAARSGSRMSLSAFTAWVRDVLEGASFMPRSEGETPVV
VLPMAQLLGRHFPATVVPGCDETHLSPSPEPPGDWTAAQRELLGLPSREALAQAAAKAWQ
ATLALPQLDLLWRTQDRGEATLPSAWLQALLPHAARDPREPRVLVCVPQEKPMPSARDVL
PEALSASAYQDLRDCPYRFFALRQLRLSEAAELEAEPDQRDMGNWLHAVLRSFHEQRRDA
RPGREADRAALDRLADETASAMGLNAGEGGAGFLPYQAVWPALREGYLDWLTGFEATEHG
PGPRFAQAEAERTSHTGPWKLYGKLDRIDLQHSPEGPIPFVLDYKTESRSKTQERVKEPL
EDTQLAFYAALLPDENLRAAYLSITDKRGDSGKDTPTWLVEQPDVLMAREQLREGLAHDM
ARVAAGQPMPALGEGRVCDFCAARGLCRKDFWSAA
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatgtaagcccgatcggcgcggccacgacgcccgcgccagaccctgggcaccct
tcggttcgacattgggccgccggcattgcgcacattgacgcggccgcccgcgagcgcgcc
ttgcccgccggccgcgtggtcgtgctcgtgccctatgcgcagctgatggatgcaggccgg
cgcgcctgggccgccgcacacccgagcggttttgcgccgcgcttcgagtccacgcgcaac
tgggccgcgagcctgcgcccctttctgcccggccctggcgacctcagcatggacatggca
cgcgacagtctcatggccgccgcgctgatcgagcgcgtggcgcccgcgcgcgccgatgcg
gccttgcgcaccgtcatggtggggcggctggtcgacgccgcgcgtcagctcgcgccatgg
gctgcggccgtgccgcccgagcatcgactggcctgggccgagcccttgcgcgcggccatg
gcacccaccacgtccgcgctgcattgggaaggccttctggcgaccctggcgctgacctgg
gtgagcacgtccgcctacgccaccgacgtgctgtgggcaccgatggcacaacccggcgcg
catgccgatctgctggtggtgctgcagggctttcaagacgatcccttggccacggcgctg
gccgctcggtggggcgatcgcgcgcttgtgcttcccttgggcgagagcgactggcgcgcc
ggcgaagaccgccgcctgcatgcctgtggcgatgcggaagacgaagcgcaacgcgccgcc
gcctgtgtgatcgagcacatcaaccagggccgcacgccggtggccctggtggccaacgac
cgcctgctcacgcgccgcgtgagcgccatgctgcaccgcgcgggcatctcggtgcgcgac
gaaaccggctggaagctctctaccacgcgcgccgccgcgcaactcatgagtgtgctgcgc
gcggccgatgcccgtgccgcgatggacgacgtgctggacctgctcaaacaagccacggcg
tggcccgacgcacagggccagcagctggagcaactcgcgcgcgaattcggcgtgtcgcgc
tggaaggccgcggtgcagcacgcgcggctcgcacccgccatcccgcagggcctgccggcc
tggatcgaaggccttcaggccgcgcgccccttgacggtgtggctgggcgatctcgcgctc
gcgctcaaggcctgtggcctgtggacatcgttcgaaaccgacccggccgggcagcaattg
ctgcaggccctgcgtctgggcgacggcgcggcgatggagttggccggtgtggcgcaagcg
gtggacgctgcggcgcgcagcggttcgcgcatgtccttgagcgcgttcactgcctgggtg
cgcgacgtgctggaaggcgcgagcttcatgccgcgcagcgagggcgagacccccgtggtg
gtcttgcccatggcacaactgctgggccgccatttccctgccaccgtggtgcccggctgc
gacgagacgcacctgagccccagccccgagcccccgggcgactggacggcggcccagcgc
gagctgctgggcctgccgtcgcgcgaggcgctggcgcaggcggcggcgaaagcctggcag
gccacgctggccttgccgcagctcgacctgctgtggcgcacccaagaccgtggtgaagcc
accttgcccagtgcctggttgcaagcgcttttgccgcacgcggcgcgggacccccgtgag
ccccgcgtgctcgtgtgcgtgccgcaggaaaagccaatgcccagcgcgcgcgacgtgctg
cccgaagcactctcggccagtgcctaccaggacctgcgcgactgcccctaccgcttcttc
gccttgcggcagctgcgcctgtccgaagcggccgaactcgaagccgagcccgatcagcgc
gacatgggcaactggctgcacgccgtgttgcgcagctttcacgaacagcgccgcgatgcc
cggcctgggcgcgaagccgaccgcgccgcgctcgaccggctcgccgacgaaaccgcgagc
gccatgggcctcaacgcaggcgagggcggtgccggctttctgccctaccaggcggtgtgg
ccggccctgcgcgaaggctatctggattggctgaccggtttcgaagccaccgaacacgga
cccgggccgcgcttcgcacaagccgaggccgaacgcaccagccacacagggccgtggaag
ctctacggcaagctcgaccgcatcgacctgcagcacagccccgaaggcccgattcccttc
gtgctcgactacaagaccgagagccgcagcaagacccaggagcgcgtgaaggaaccgctg
gaggacacgcagttggccttctacgccgccttgctgcccgatgagaacctgcgcgccgcg
tacctcagcatcaccgacaagcgtggcgacagtggcaaggacaccccgacctggctggtc
gagcagcccgacgtgctgatggcgcgcgagcaactgcgcgaaggtttggcgcacgacatg
gcgcgcgtggccgccggccagcccatgcccgcgctgggcgaaggccgcgtgtgcgacttc
tgcgccgcgcgtggcctgtgccgcaaagatttctggagtgccgcatga
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