Hydrogenophaga sp. BPS33: F9K07_16350
Help
Entry
F9K07_16350 CDS
T06379
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F9K07_16350 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyn03021
]
F9K07_16350 (rho)
03019 Messenger RNA biogenesis [BR:
hyn03019
]
F9K07_16350 (rho)
Transcription machinery [BR:
hyn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
F9K07_16350 (rho)
Messenger RNA biogenesis [BR:
hyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F9K07_16350 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
NACHT
S1CSD-TOTE-2
Spore_III_AA
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
QHE86363
LinkDB
All DBs
Position
3529141..3530403
Genome browser
AA seq
420 aa
AA seq
DB search
MHLNELKALHVSEVLKQAEALEIENPGRMRKQELMFAIIKKRAKGGELVYADGVLEVLPD
GFGFLRAPDTSYTASTDDIYISPSQIRRFNLHTGDMIEGEVRIPKDGERYFALNKLDKIN
SLPPEDNKHKIMFENLTPLFPKEQMRLERDIKSEENITGRVIDIIAPIGRGQRALIVAPP
KSGKTVMMQHLCHAITANHPEVVLMVLLVDERPEEVTEMQRTVRGEVIASTFDEPAARHV
HVAEMVIERAKRLVELGKDVVIMLDSITRLARAYNNVLPSSGKVLTGGVDANALQRPKRF
FGAARKIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNCEIHLDRRLYEKRVFPSIQL
NRSGTRREELLLQPEILQKTRILRQFMYNMDEIEAMEMVLKSMKSTKNNSEFFDMMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttaacgaactcaaggcactgcacgtgtctgaagtcctcaagcaggccgaagcc
cttgagatcgaaaaccccggccgcatgcgcaagcaggagctgatgttcgccatcatcaag
aagcgcgccaagggcggcgagctggtgtatgccgacggcgtgctcgaagtgctgcccgat
ggcttcggcttcctccgcgcgccggacaccagctacacggccagcaccgacgacatctac
atctcgcccagccagatccgccgcttcaacctgcacaccggcgacatgatcgaaggcgaa
gtgcgcatccccaaggacggcgaacgctacttcgcgctcaacaagctcgacaagatcaac
agcctgcctcccgaggacaacaagcacaagatcatgttcgagaacctgacgccgctgttc
cccaaggaacagatgcgcctggaacgcgacatcaagagcgaagagaacatcaccggccgc
gtgatcgacatcatcgcccccatcggccgcggccagcgcgcgctgatcgtcgcaccaccc
aagagcggcaagacggtgatgatgcagcacctgtgccacgcgatcaccgccaaccaccct
gaagtggtgctgatggtgctgctggtggacgagcgccctgaggaagtgaccgaaatgcag
cgcaccgtgcgcggcgaggtcatcgcctccaccttcgacgaacccgctgcccgccacgtg
cacgtggccgagatggtgatcgagcgcgccaagcgcctggtcgagctcggcaaggacgtc
gtgatcatgctcgactccatcacccgcctggcccgcgcctacaacaacgtgctgccctcc
agcggcaaggtgctcaccggtggcgtcgacgccaatgccctgcaacgtcccaagcgcttc
ttcggcgcggcgcgcaagatcgaggaaggcggctcgctcaccatcatcgccaccgccctg
gtcgacaccggcagccggatggacgaagtgatctttgaagagttcaagggcaccggcaac
tgcgaaatccacctggaccgccgcctgtacgaaaagcgcgtgttcccctcgatccagctc
aaccgcagcggcacgcgccgcgaagaattgctgctgcagcccgagatcctgcagaagacc
cgcatcctgcgccagttcatgtacaacatggacgaaatcgaggccatggagatggtgctc
aagagcatgaagtccacgaagaacaattccgagttcttcgacatgatgcggcggggcggc
taa
DBGET
integrated database retrieval system
