Hydrogenophaga sp. BPS33: F9K07_18440
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Entry
F9K07_18440 CDS
T06379
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
F9K07_18440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyn03400
]
F9K07_18440
DNA repair and recombination proteins [BR:
hyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
F9K07_18440
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QHE86735
UniProt:
A0A6P1IXJ9
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All DBs
Position
complement(3971856..3972908)
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AA seq
350 aa
AA seq
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MATRTRTTHKTPSKRASPSAAEDAQAPTSTRTMWKGAISFGLVHIPVGLYSATAPSGVDF
DWLDRRSMEPVGYKRVNKVTGKEVAMSDIVKGVEVEEGHYVVLTPEEIASAYPKTTQTIE
IESFVDADEIPFVYLERPYYTAPLKRGEKVYALLRESLQQSHKVGVAKVVIQSKQHLAVL
IPCGRAMVLNLLRWGGEIRSFEQLDLPPLGAKAAGIKEAELKMARQLIDDMTEPWNADSF
RNSFAQEIHKLVETKATAGKVTRVEKVEEEEGARGGTSNVLDLTALLKRSLGGKRGAAKG
EAATVTQLPSAKAPASKKAAPATRKTPASKTPAKKAAAKAATRKPARRAA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggccacccgcacccgcaccacccacaaaaccccgtccaagcgcgcgagcccttctgca
gcggaagacgcgcaggcacccacctccacccgcaccatgtggaagggtgccatcagcttc
ggcctggtgcacattcccgtgggcctgtactcggccacggccccttcgggtgtggacttc
gactggctggaccgccgctccatggaaccggtgggctacaagcgcgtgaacaaggtgacc
ggcaaggaagtggccatgtcggacatcgtcaagggagtggaagtcgaagaagggcactac
gtggtgctcacgcccgaagagatcgcctcggcctatccgaagaccacgcagacgatcgag
atcgagtccttcgtcgacgccgacgagattcccttcgtctacctggaacggccttactac
accgcgccgctcaagcgcggcgagaaggtgtacgcgctgttgcgcgagtcgctgcagcaa
agccacaaggtgggtgtggccaaggtggtgatccagtccaagcagcacctggcggtgctc
attccctgcggccgcgcgatggtgctcaacttgctgcgctggggcggcgagatccgctcg
ttcgagcagttggacttgcccccgctgggcgcgaaagcggcgggcatcaaggaggccgaa
ctcaagatggcccgccaactgatcgacgacatgaccgagccctggaacgcggacagcttt
cgcaattcgttcgcgcaggagatccacaagctggtcgaaaccaaggccacggccggcaag
gtgacgcgggtggagaaggtcgaagaagaagagggcgcgcgtggcggcacgtccaacgtg
ctggatctcaccgccttgctcaagcgcagcctgggaggcaagcgcggtgcggcaaaaggc
gaggccgccacggtgacgcaactgccgagcgcgaaagcgccggcttcgaaaaaggcggcg
ccggccactcgcaagacacccgccagcaagacgcccgcgaagaaggctgccgcgaaagcg
gcgactcgaaaacccgcgcggcgcgcggcgtga
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