KEGG   Hydrogenophaga sp. BPS33: F9K07_18440
Entry
F9K07_18440       CDS       T06379                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
hyn  Hydrogenophaga sp. BPS33
Pathway
hyn03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hyn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    F9K07_18440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyn03400]
    F9K07_18440
DNA repair and recombination proteins [BR:hyn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     F9K07_18440
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QHE86735
UniProt: A0A6P1IXJ9
LinkDB
Position
complement(3971856..3972908)
AA seq 350 aa
MATRTRTTHKTPSKRASPSAAEDAQAPTSTRTMWKGAISFGLVHIPVGLYSATAPSGVDF
DWLDRRSMEPVGYKRVNKVTGKEVAMSDIVKGVEVEEGHYVVLTPEEIASAYPKTTQTIE
IESFVDADEIPFVYLERPYYTAPLKRGEKVYALLRESLQQSHKVGVAKVVIQSKQHLAVL
IPCGRAMVLNLLRWGGEIRSFEQLDLPPLGAKAAGIKEAELKMARQLIDDMTEPWNADSF
RNSFAQEIHKLVETKATAGKVTRVEKVEEEEGARGGTSNVLDLTALLKRSLGGKRGAAKG
EAATVTQLPSAKAPASKKAAPATRKTPASKTPAKKAAAKAATRKPARRAA
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggccacccgcacccgcaccacccacaaaaccccgtccaagcgcgcgagcccttctgca
gcggaagacgcgcaggcacccacctccacccgcaccatgtggaagggtgccatcagcttc
ggcctggtgcacattcccgtgggcctgtactcggccacggccccttcgggtgtggacttc
gactggctggaccgccgctccatggaaccggtgggctacaagcgcgtgaacaaggtgacc
ggcaaggaagtggccatgtcggacatcgtcaagggagtggaagtcgaagaagggcactac
gtggtgctcacgcccgaagagatcgcctcggcctatccgaagaccacgcagacgatcgag
atcgagtccttcgtcgacgccgacgagattcccttcgtctacctggaacggccttactac
accgcgccgctcaagcgcggcgagaaggtgtacgcgctgttgcgcgagtcgctgcagcaa
agccacaaggtgggtgtggccaaggtggtgatccagtccaagcagcacctggcggtgctc
attccctgcggccgcgcgatggtgctcaacttgctgcgctggggcggcgagatccgctcg
ttcgagcagttggacttgcccccgctgggcgcgaaagcggcgggcatcaaggaggccgaa
ctcaagatggcccgccaactgatcgacgacatgaccgagccctggaacgcggacagcttt
cgcaattcgttcgcgcaggagatccacaagctggtcgaaaccaaggccacggccggcaag
gtgacgcgggtggagaaggtcgaagaagaagagggcgcgcgtggcggcacgtccaacgtg
ctggatctcaccgccttgctcaagcgcagcctgggaggcaagcgcggtgcggcaaaaggc
gaggccgccacggtgacgcaactgccgagcgcgaaagcgccggcttcgaaaaaggcggcg
ccggccactcgcaagacacccgccagcaagacgcccgcgaagaaggctgccgcgaaagcg
gcgactcgaaaacccgcgcggcgcgcggcgtga

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