Hydrogenophaga sp. BPS33: F9K07_19810
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Entry
F9K07_19810 CDS
T06379
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hyn
Hydrogenophaga sp. BPS33
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyn03032
]
F9K07_19810 (gyrA)
03400 DNA repair and recombination proteins [BR:
hyn03400
]
F9K07_19810 (gyrA)
Enzymes [BR:
hyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F9K07_19810 (gyrA)
DNA replication proteins [BR:
hyn03032
]
Prokaryotic type
DNA Topoisomerases
F9K07_19810 (gyrA)
DNA repair and recombination proteins [BR:
hyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F9K07_19810 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QHE86983
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Position
4270765..4273413
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AA seq
882 aa
AA seq
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MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLSKIAHEMLGDIDKETVNFGPNYDGSEKEPLVLPSRLPNLLVNGSAGIAVGMAT
NIPPHNLNEVVDACLHLLKSPQASIDDLMEIIPAPDFPTAGIIYGISGVKDGYRTGRGRV
VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERIAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPRLCNLKDLIQVFLEHRRE
VVTRRTVFNLRKARERGHVLEGLAVALANIDDFIRIIRESPTPPVAKAELMSRPWDSQLV
REMLTRTRADGGVINADDYRPDGLEKAFGMGGDGLYRLSETQAQEILQMRLQRLTGLEQD
KIVAEYKEVMGEIDDLLDILAKPERVSTIIGDELTIVKQEFGQTKLGARRSEIEHNAQDL
ATEDLITPTDMVVTLSHSGYIKSQPLSEYRSQKRGGRGKQATATKEDDWIDQLFIANTHD
YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVVLPLTGEMRAFPADR
YVFMSTSMGTVKKTALDEFSNPRKAGIIAVDLDEGDFLVGAALTDGAHDVMLFSDGGKAV
RFDENDVRPMGRNARGVRGMMIEDGQSVIAMLVAEDEEQSVLTATINGYGKRTPIAEYTR
HGRGTKGMIAIQQSERNGKVVAATLVHNDDEIMLITDKGVLVRTRVSEIREMGRATQGVT
LIALDEGAELSGLQRIVENDANAPDVGEGDDTGEADAPGTAA
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgacacagtttgccaaagagaccctgcctatcagccttgaagaggagatgcggcgaagc
tacctcgactacgcaatgagcgtgatcgtcggccgtgcgctgcccgacgcgcgcgacgga
ctcaagcccgtgcatcggcgggtgctgtttgccatgcatgagctgaacaacgattggaac
aggccctataaaaagtctgcacgtatcgtgggtgatgtgattggtaagtaccacccgcac
ggcgacagcgcggtctacgacacgatcgtccgcatggcgcaggatttctcgctgcgccac
atgctggtcgatggacagggcaatttcgggtcggtcgacggcgacaacgctgccgccatg
cgctacacggaaatccggctatccaagatcgcccacgagatgctgggcgacattgacaag
gagaccgtcaatttcggcccgaactacgacggctcggagaaagagccgctggtgctgccc
tcgaggctgcccaatctgctcgtcaacggttcagccggcatcgcggtcggtatggcgacc
aacattccgccgcacaacctgaacgaagtggtcgacgcctgcctgcacttgctcaaaagt
ccgcaagcctcgatcgacgatctcatggagatcatcccggcgcccgactttcccaccgcc
ggcatcatctatggcatcagcggcgtcaaggacggataccgcacggggcgtggccgtgtc
gtcatgcgcgccaaatgccatttcgaggacatcgaccgaggccagcgccaagccatcatt
gtcgacgagttgccctaccaggtgaacaagaaaacgctgcaggagcgtattgccgagctg
gtgcacgaaaagaagatcgagggcatcagccacattcaagacgagtcggacaaatcgggc
atgcgcctggtgatcgaactcaagcgtggcgaagtaccggaggtggtgctcaacaacctg
tacaagcaaacgcaactgcaggacaccttcggcatcaacatggtggccctggtggatggc
cagcctcgcctgtgcaacctgaaagacttgatccaggtgttcctggagcaccgccgcgag
gtggtgacccgccgcaccgttttcaacctacgcaaggcacgcgagcgtggccacgtgctg
gaaggcctggccgtcgcgctggccaacatcgacgatttcatccgcatcatccgcgagtcg
cccacgccaccggtggcgaaagccgaactcatgtcccggccctgggacagccagctggtg
cgcgaaatgctcacccgaacgcgcgccgacggcggtgtgatcaatgccgacgactaccgc
ccggacggattggaaaaagcctttggcatgggcggcgacggtctgtaccgcctctccgaa
acccaggcgcaggagattttgcagatgcgtctgcaacgcctgacggggctggagcaggac
aagatcgtcgcggaatacaaggaggtcatgggcgagatcgacgatctgctggacatactc
gccaagccagaacgtgtgtcgaccatcatcggcgacgagctgacgatcgtgaagcaggag
ttcggccagaccaagctgggcgcgcgccgaagcgagatcgagcacaacgcgcaggacttg
gccaccgaagacctgatcacccccaccgacatggtcgtgacactcagccacagcggctac
atcaagagccagcccctgtcggagtaccgatcgcaaaagcgcggtgggcgtggcaagcag
gccaccgccaccaaggaagacgactggatcgaccagctcttcattgccaacacgcacgac
tacatcctgtgcttctccaaccgcgggcggctgtattggctcaaggtatgggaggtgcca
gcgggttcgcgcggctcgcgcggtcgtccgatcgtgaacatgttccccttgcaagaaggt
gaaaagatcaacgtggtcctgcctctgacgggggagatgcgcgcattcccggccgatcgc
tatgtgttcatgtccaccagcatgggcacggtcaagaagacggcgctggacgagttcagc
aatccgcgcaaggccggcatcatcgcggtggacctggacgaaggagacttcctggtcggt
gccgcgctgaccgacggtgcgcacgatgtcatgttgttcagcgatggcggcaaggcggtg
cggttcgacgagaacgacgttcgaccgatgggccgcaatgcgcgcggcgtgcgcggcatg
atgatcgaagacggtcaaagcgtgatcgccatgctggtggccgaagacgaggagcaaagc
gtcctgaccgccaccatcaacggttatggcaagcgcacgcccatcgccgaatacacccgc
cacggccgcggcaccaaggggatgatcgcgatccagcaaagcgaacgcaacggcaaggtg
gtggcggccacgctggtgcacaacgacgacgagatcatgctgatcaccgacaagggcgtg
ctggtgcgcacccgtgtgtcggagattcgcgaaatgggtcgggccacgcagggtgtcacg
ctgatcgcgctggacgaaggcgccgagctttcgggcttgcagcggattgtggaaaacgat
gccaacgcaccggacgtgggtgaaggcgacgacacgggcgaagccgacgcgccgggcacc
gcagcgtga
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