Hydrogenophaga sp. BPS33: F9K07_19840
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Entry
F9K07_19840 CDS
T06379
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
hyn
Hydrogenophaga sp. BPS33
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyn03032
]
F9K07_19840
03036 Chromosome and associated proteins [BR:
hyn03036
]
F9K07_19840
03400 DNA repair and recombination proteins [BR:
hyn03400
]
F9K07_19840
DNA replication proteins [BR:
hyn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
F9K07_19840
Chromosome and associated proteins [BR:
hyn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
F9K07_19840
DNA repair and recombination proteins [BR:
hyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
F9K07_19840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QHE86988
UniProt:
A0A6P1J5C2
LinkDB
All DBs
Position
4280544..4280864
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AA seq
106 aa
AA seq
DB search
MTRSDLVEALASQFGQLTHRDAEFAVKAILDAMGDALVKGHRIEIRGFGSFSVNRRSPRI
GRNPRSGESVMIPEKRVPHFKPGKALREAVDKKTAEILGRDTQKRA
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtagcgacctcgttgaagcgctggccagccagtttggccagttgacccaccgc
gatgcagaatttgccgtcaaggcgatcctggatgcgatgggcgacgcgctggtcaaaggt
caccgcatcgagatccggggctttggcagcttttctgtgaaccgccgttctccccgcatc
ggccgcaatccgcggtcgggcgagagtgtgatgattccggagaagcgcgtgccgcacttc
aaacccggcaaggccctgcgagaagcggtcgacaagaagacggccgagatcctgggtcgc
gatacccagaagcgcgcctga
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