KEGG   Hydrogenophaga sp. BPS33: F9K07_21280
Entry
F9K07_21280       CDS       T06379                                 
Name
(GenBank) AAA family ATPase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hyn  Hydrogenophaga sp. BPS33
Pathway
hyn03420  Nucleotide excision repair
hyn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hyn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    F9K07_21280
   03430 Mismatch repair
    F9K07_21280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyn03400]
    F9K07_21280
Enzymes [BR:hyn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     F9K07_21280
DNA repair and recombination proteins [BR:hyn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     F9K07_21280
   MMR (mismatch excision repair)
    Other MMR factors
     F9K07_21280
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor Viral_helicase1 AAA_12 AAA_30
Other DBs
NCBI-ProteinID: QHE87248
UniProt: A0A6P1J605
LinkDB
Position
complement(4640948..4643365)
AA seq 805 aa
MLFEDPVAPSPLLAGLNAEQGAAVALPPEHALILAGAGSGKTRVLTTRIAWLLQTGQVSP
GGILAVTFTNKAAKEMMTRLSAMLPINVRGMWIGTFHGLCNRFLRAHHKLANLPATFQIL
DTQDQLSAIKRLCKQFNVDDERFPPKQLQYFISGCKEDGQRPRDVVARDEETRKKIELYG
LYEEQCQREGVVDFGELMLRSFEVLRDNDPVREHYQRRFRHILIDEFQDTNRLQYAWIKM
FSAPPLEGLPSSGNAVFAVGDDDQSIYAFRGARVGNMADFVREFHVRHQIKLEQNYRSAS
NILDSANELISHNTKRLGKNLRTDAGAGEPVRVFEATSDFAEAQWMVDEMKQLAREDVPR
SEMAVLYRSNAQSRVVETALFNAGLPYRVYGGLRFFERAEIKHALAYLRLLENPHDDTSF
LRVVNFPPRGIGARSIEQLQDVARASGCSLHDAVSAVTGRAGVAIGGFVAKLDVLRERSD
GMTLSEIIELVIEHSGLLEHFRAEREGQDRVENLEELVSAAKSFVGIEGFGRDAVARTVD
AKGQPLTQSPASQGLDPNLPVVDEPLAPDAETGETMSPLAAFLTHAALESGDNQAQAGQD
AVQLMTVHAAKGLEFDCVFITGMEEGLFPHENSMNDRESLEEERRLMYVAITRARKRLYL
SHSQTRMLHGQTRYNLKSRFFDELPEACLKWLTPPQPAWSAPMGGGGGGQWQNGRRAYGA
PAALQPSWSPGFKEQGDPKGLGQKAPDPDRGTEIRAGLAVFHNKFGEGKVLAVEGAGDDA
RAQVSFTRHGTKWLALSVAKLTPIT
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgctgtttgaagatcccgttgccccgtccccgctgctcgcgggcctcaatgccgaacag
ggcgccgccgtggcgctgccgcccgagcacgcgctcattctggccggcgccggttcgggc
aagacgcgggtgctcaccacgcgcatcgcctggctgctgcagaccgggcaggtgtcgccc
ggcggcatcctggccgtgaccttcaccaacaaggccgccaaggaaatgatgacgcggctc
tccgcgatgttgccgatcaacgttcgcggcatgtggatcggcaccttccacggcttgtgc
aaccgctttttgcgcgcgcaccacaagctggcgaatctgccggccaccttccagatcctg
gacacgcaggaccagctctccgccatcaagcggctgtgcaaacagttcaacgtcgacgac
gagcgctttccgcccaagcaactgcagtacttcatcagcggctgcaaggaagacgggcag
cgcccgcgcgacgtggtagcgcgcgatgaggaaacccgcaagaagatcgagctgtacggg
ctctacgaagagcagtgccagcgcgaaggcgtggtcgacttcggtgagctcatgctgcgc
agttttgaggtgctgcgcgacaacgacccggtgcgcgagcactaccagcggcgcttccgg
cacatcctgatcgacgagttccaggacaccaaccgcctgcagtacgcgtggatcaagatg
ttcagtgcgccaccgctcgaaggcctgccgtcgtcgggcaacgcggtgttcgcagtgggc
gatgacgaccagagcatctacgcctttcgcggtgcgcgtgtgggcaacatggccgacttc
gtgcgcgagttccacgtgcgccaccagatcaagctggagcagaactaccgcagcgcgagc
aacatcctggactcggccaacgagctcatcagccacaacacgaagcgcctgggcaagaac
ctgcgcaccgacgcgggcgcgggtgaaccggtgcgcgtgtttgaagccaccagcgatttc
gccgaagcgcagtggatggtcgacgagatgaagcagctcgcgcgcgaagacgtgccgcgc
agcgaaatggccgtgctctaccgcagcaacgcgcaaagccgtgtggtggaaacggccttg
ttcaacgccggcctgccgtaccgcgtgtacggcggcctgcgcttcttcgagcgcgccgaa
atcaagcacgcgctggcttacctgcgcctgctggagaacccgcacgacgacaccagtttt
ctgcgcgtggtgaactttccgccgcgcggcattggcgcgcgcagcatcgaacagttgcag
gacgtggcgcgcgcctcgggctgttcgctgcacgacgcggtgagcgcggtcaccggccgc
gcgggtgtggccattggtggtttcgtggccaagctcgatgtgctgcgcgaacgctccgac
ggcatgacgctgagcgagatcatcgagctggtgatcgagcacagcgggttgctggagcac
ttccgggcagagcgcgaagggcaggaccgcgtggaaaacctggaagaactggtgagcgcg
gccaagagctttgtcggcatcgagggttttggccgcgacgcggtggcgcgcaccgtggac
gcgaagggccagccgttgacgcagagtccggccagccaggggctggacccgaacctgccg
gtggtggacgaaccgctcgcgcccgatgccgaaaccggcgaaaccatgagtccgctcgcc
gcgttcctcacccacgccgcgctcgagtccggtgacaaccaggcgcaagccggtcaggac
gccgtgcagctcatgactgtgcacgccgccaaaggcctggaattcgattgcgtgttcatc
accggcatggaagagggcctgttcccgcacgagaactcgatgaacgatcgcgaaagcctg
gaggaagagcggcgtctgatgtatgtggcgatcacgcgtgcgcgcaagcggctctacctg
agccattcgcagacgcgcatgctgcacggccagacgcgctacaacctcaagagccgcttc
ttcgacgagctgcccgaggcctgcctgaagtggctcacgccaccgcagccggcctggtcc
gcgcccatgggcggtggcggtggtggccagtggcagaacgggcggcgtgcatacggcgca
ccggccgcgctgcagccgtcgtggtcacccggcttcaaggagcagggcgaccccaagggc
ctgggccaaaaggcgcccgaccccgaccgcggcaccgagatccgcgcaggtcttgccgtg
tttcacaacaagttcggcgagggcaaggtgctggcggtggaaggcgcgggcgacgatgcg
cgcgcgcaggtcagcttcacgcgccacggcaccaagtggctggcgctcagcgtggccaaa
ctaacaccgatcacttga

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