Hydrogenophaga sp. BPS33: F9K07_23090
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Entry
F9K07_23090 CDS
T06379
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
F9K07_23090
09124 Replication and repair
03420 Nucleotide excision repair
F9K07_23090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyn03021
]
F9K07_23090
03036 Chromosome and associated proteins [BR:
hyn03036
]
F9K07_23090
03400 DNA repair and recombination proteins [BR:
hyn03400
]
F9K07_23090
Enzymes [BR:
hyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
F9K07_23090
Transcription machinery [BR:
hyn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
F9K07_23090
Chromosome and associated proteins [BR:
hyn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
F9K07_23090
DNA repair and recombination proteins [BR:
hyn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
F9K07_23090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QHE87573
UniProt:
A0A6P1IY69
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All DBs
Position
5023070..5025352
Genome browser
AA seq
760 aa
AA seq
DB search
MRTAPLSDELTATATATVAVRVLCAFAAKTGDLDLRFTPSPSAQDGIAGHATVTSRRAPG
YQREVSLSAQHDGLRVQGRADGFDPATPRLEEIKTHRGDAALIPENHRALHWAQARVYGW
MLCQQLGLERIELALVYFNIDTGQETALPVWHSAIELKAFFESLCTRYASWARAEQAHRA
ARNAALQTLAFPFDGFRPGQRELAAAVYRAHGAGRHLLAQAPTGIGKTMATLFAALRAAP
AQGTDKLLYLTAKTPGRQLALQALQRMQTRPLRVLELVAREKACEHPDKACHGDSCPLAR
GFYDRLPPAREAAVQAAWLDKAALRNIASQHEVCPYYLSQELLRWSDVVVGDFNHFFDVS
AQAWSLAVNDDLRVGLLVDEAHNLIERARLMYSADLNPAAFHAARRGATGTLKKAMDRLH
RQWSALARIHVQPHQLLPELPQGFIDALQQHSAALSEHLALEPSAAQNELPNWLFEVLHF
VRIAELFDTHSLADLTHPARPVGRSRHPVLTIRNLDPGPLLQPRWQSAHSATLFSATLSP
MDYAHDLLGLPDNTLRLDVPSPFQSTQLSARITPQISTRYADRAASLDDVVAVMAQQYAL
RPGNYLAFFSSFDYLQQALQRLQALHPELPVWAQSRGMGEAERDAFVARFTDDGQGIGFA
VLGGAFGEGIDLPGRRLIGAFIATLGLPQVNPVNEQLRARLQTRFGQGYNYAYLFPGVQK
VVQAAGRVIRGPQDEGVLVLMDERFGRAEVRRLLPTWWCV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccgcccccctgtctgacgaattgacggccacggccaccgccacggtggccgtg
cgcgtgttgtgcgcgttcgcggccaagacgggcgatctggacctgcgcttcacaccctcg
ccaagcgcgcaggacggcatcgccggccatgccacggtcacatcgcggcgcgcgccgggc
taccagcgcgaggtctcgctgagcgcgcagcacgatgggctgcgcgtgcaaggccgtgcc
gacggcttcgacccagccacgccacggctcgaagagatcaagacccatcggggcgacgcg
gcgctgattcccgaaaaccaccgcgcgctgcactgggcgcaggcgcgggtgtatggctgg
atgttgtgccagcaactggggttggagcgcatcgaactcgcgctcgtctacttcaacatc
gacaccgggcaggaaaccgcgttgccggtgtggcacagcgccatcgagctcaaggccttt
ttcgagtcgctgtgcacgcgttacgccagttgggcacgcgccgagcaggcgcaccgggcc
gcgcgcaatgccgcgctgcagacgcttgcttttcccttcgacggctttcgccccgggcaa
cgcgaactggccgccgcggtgtaccgcgctcacggtgcgggccgccatctgctggcccag
gcgcccacgggcatcggcaagaccatggccacactgttcgccgccttgcgcgcggcaccg
gcgcaaggcaccgacaagctgctgtacctcaccgccaagacaccgggtcgccagctcgca
ctgcaggccttgcagcgcatgcagacacggcccctgcgcgtgctcgaactcgttgcgcgc
gagaaggcctgcgagcaccccgacaaggcctgccacggcgattcgtgtcctctggcgcgt
ggcttctacgaccgcttgccacccgcgcgcgaagccgcggtgcaagcggcctggctcgac
aaggccgccttgcgcaatatcgcatcgcagcacgaggtctgcccctactacctcagccag
gagctgctgcgctggtccgatgtggtcgtgggcgacttcaaccatttcttcgacgtcagc
gcgcaagcctggtcgctcgccgtcaacgacgacctgcgcgtgggtctgttggtggacgag
gcccacaacctcatcgagcgcgcgcggctgatgtacagcgccgatctgaaccccgccgcc
ttccacgccgcgcgccgcggcgcgacgggcaccttgaagaaggccatggaccggctacac
cgccagtggagcgccctggcccgcatccacgtgcaaccccaccagttgctgcccgaattg
ccgcagggcttcatcgacgccttgcagcagcacagcgccgcgttgtccgagcacctggcg
ctcgaacccagcgccgcacaaaacgaactgccgaactggcttttcgaggtgctgcacttc
gtgcgcatcgccgagttgttcgacacgcattcgctcgcggacctcacgcacccagcgcgt
ccagtgggccgctcgcgccacccggtactcaccatccgcaacctggacccgggccccctg
ctccaaccgcgctggcagagcgcgcacagcgccacgctgttctcggccacgctcagcccc
atggactacgcacacgacctgctcggcctgcccgacaacacgctgcggctggatgtgcct
tcgccgttccagtccactcaactgagcgcgcgcatcacgccacagatctccacgcgctac
gccgaccgcgccgcttcgctggacgacgtggtcgccgtgatggcccagcagtacgccctg
cgccccggcaactacctcgctttcttcagcagcttcgactatctgcaacaggcgctgcaa
cgcttgcaggcactgcaccccgagctgcccgtgtgggcgcagtcgcgcggcatgggtgaa
gccgagcgcgatgcgttcgtggcgcgtttcaccgacgatggccagggtattggctttgcc
gtgctgggcggcgcgttcggcgaaggcatcgacctgccggggcgccgtctcatcggcgcc
ttcatcgccacgctgggcctgccccaggtcaacccggtgaacgagcaattgcgcgcgcgg
ctgcagacgcgttttggccagggctataactacgcctacctgttccccggtgtgcagaag
gtcgtgcaagccgcggggcgcgtgatccgcgggccgcaggacgaaggggtgctggtgctg
atggacgagcgcttcggccgtgccgaggtgcgccgcctgctgcccacttggtggtgtgtt
tag
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