Hydrogenophaga sp. BPS33: F9K07_23915
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Entry
F9K07_23915 CDS
T06379
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hyn
Hydrogenophaga sp. BPS33
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyn03400
]
F9K07_23915
Enzymes [BR:
hyn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
F9K07_23915
DNA repair and recombination proteins [BR:
hyn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
F9K07_23915
Prokaryotic type
F9K07_23915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
PGM_PMM_II
DNA_pol3_theta
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
QHE87724
UniProt:
A0A6P1J0Y9
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All DBs
Position
5198775..5200268
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AA seq
497 aa
AA seq
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MNNYDKGLMWFRRDLRAEDNAALYHALKSCRQVWCVFVFDTDILDDLLERGLRADRRVEF
IRESLVELDGQLRALGREHGRQGVGLIVLHGPARQAVPSLAQKLGVQVVFANHDDEPAAL
ARDAQVLGELAHAGILLHSHKDHVIFERREVLTQAGHAFGVFTPYKNAWLKALTPFHLKA
YPVATYAGVLADVPAAQARPIPALRELGFEATNLARLALPTGARGAHQLFEDFVERIERY
GEARDFPAVKGPSYLSAHLRFGTISIRHIASVAYQMHLQGISGASTWLSELVWRDFYHQV
LANFPHVTDKAFRQEYDAIKFEHGKHAKTLFAAWCEGRTGYPLVDAAMAQIHQTGYMHNR
LRMVVASFLVKDLGIHWQWGERYFADHLIDFDLAANNGGWQWASSSGCDAQPWFRIFNPV
TQSEKFDPQGKFIRRYLPQLAGLPDAAIHAPWKANDIELAAAGVVLGETYPHPIVDHAVA
RERTLQRYAVVKNPGRL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactacgacaaaggccttatgtggttccgccgcgatctgcgcgcagaggacaac
gcggcgctgtaccacgccctcaagtcatgccgccaggtctggtgtgtgttcgtgttcgac
accgacatcctcgacgatctcctggagcgcggcctgcgggcagatcgccgcgtggagttc
atccgcgagtcgctggtggaactggacgggcaattgcgcgcactgggacgcgagcacggc
aggcaaggtgtcggcttgatcgttctgcacggcccggcgcgccaggccgtgccctccctg
gcgcagaagctgggcgtgcaggtggtgttcgccaaccacgacgatgaacccgccgcgctg
gcgcgcgatgcccaggtgctgggcgagctggctcacgccggcatcctcctgcacagccac
aaggaccacgtgatcttcgagcggcgcgaagtgctcacgcaggccggccatgcgtttggc
gtgttcacaccctacaagaacgcctggctcaaggcgctcacgccctttcatctcaaggcg
tatcccgtggccacctatgcaggcgtgctcgccgacgtgcccgctgcgcaggccaggccc
atccccgctctgcgcgagctgggcttcgaggccaccaacctggcgcggcttgccctgccc
acgggtgcccgcggggcgcaccaattgttcgaggatttcgtcgagcgcatcgagcgctac
ggcgaggcgcgcgactttcccgccgtgaaaggccccagctacctgagcgcgcacctgcgc
tttggcaccatctcgatccgccacatcgcctcggtggcctaccagatgcatctgcaaggc
atttcgggcgccagcacttggttgtccgagctggtgtggcgcgacttctaccaccaggtg
ctcgccaactttccgcacgtgacggacaaagccttcaggcaagagtacgacgcgatcaag
ttcgaacacggcaaacacgccaaaaccctgtttgccgcctggtgcgagggccgcaccggc
tacccgctggtggacgcggcgatggcgcagatccatcagaccggctacatgcacaaccgc
ctgcgcatggtggtggccagcttcctggtgaaggacctcggcatccactggcaatggggc
gagcgctactttgccgaccacctgatcgacttcgacctcgccgccaacaacggtggatgg
caatgggccagctccagtggatgcgatgcacaaccctggttccgcatcttcaaccccgtg
acccagagcgaaaagttcgatccacaaggcaagttcatccggcgctacctgccccagttg
gcgggtttgccggatgccgcgatccacgcgccctggaaggccaacgacatcgaactggcc
gccgccggggtggtgctgggcgagacgtacccgcatcccatcgtcgaccacgcggtggcg
cgtgagcgcaccttgcagcgctatgcggtggtgaaaaacccgggcaggctttaa
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