Hydrogenophaga sp. BPS33: F9K07_24220
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Entry
F9K07_24220 CDS
T06379
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F9K07_24220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hyn02022
]
F9K07_24220
02035 Bacterial motility proteins [BR:
hyn02035
]
F9K07_24220
Two-component system [BR:
hyn02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
F9K07_24220
Bacterial motility proteins [BR:
hyn02035
]
Pilus system
Twitching motility proteins
F9K07_24220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA
AAA_16
HTH_30
AAA_2
DUF7550
Motif
Other DBs
NCBI-ProteinID:
QHE87777
LinkDB
All DBs
Position
5263334..5264869
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AA seq
511 aa
AA seq
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MANPPQAASILVVDDEPDLRTLYELTLLREGHAVVAAPDLAQAREWLSQQRFDVLISDMR
LPDGLGLELLRELADTQRNEKCIVITAYGSAENAVESLKAGAFDYLTKPVDLKQLRSAVA
AALQSQRVPAQASGTGGTHGNGGTPNGHSAANGSTEAARRSTAPMSGAQSLRRIVGNAPS
IVQIKARIGKVASSMAPVLILGESGTGKELVARAVHDCSHRSAGPFVAVNCGAIPENLIE
AEFFGARKGAYTGATTDREGYFQAARGGTLFLDEIGDLPLAMQAKLLRVIQERRVRALGG
VQEEAVDVRLVSATHRDLNALVQSGQFRQDLFYRLNVIGLRTPSLRERREDLPSLVSALL
ARLCAESGQSVPDLSPHALAWLLARDLPGNVRELENLLQRALALSSGETLEPDDFGDTDH
AAIEIPTQPTPLAPADPAPRPPVSPPPADIPADLQAYLDEQERQVLLKALRESDFNRTAA
AARLGLNLRQMRYRIQRLGIVMPSSDDDETP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggccaacccgccccaagccgcctccatcctcgtcgtcgacgacgaacccgacctgcgc
acgctgtacgagctgaccctgctgcgcgaaggccatgcggtggtcgccgcacccgacctg
gcccaggcgcgcgagtggctcagccagcagcgctttgacgtcctgatctcggacatgcgc
ctgcccgatggcctgggcctggagctgctgcgcgaactggcggacacccagcgcaacgaa
aagtgcatcgtgatcaccgcctacggctcggccgagaacgcggtcgaatcgctcaaggcc
ggcgccttcgactacctcaccaagccggtcgacctcaaacaactgcgcagcgcggtggca
gccgccttgcaaagccagcgcgtgccagcgcaggccagcggcaccggtggaacccatggc
aacggcggcacgccgaatggccacagcgccgccaacggctcgaccgaggcggcgcgcagg
tccaccgcgcccatgagcggcgcgcagtcgctgcggcgcatcgtaggcaacgcgcccagc
atcgtgcagatcaaggcccgcatcggaaaggtcgcttccagcatggcgccggtgctgatc
ctgggcgagtccggcaccggcaaggagctcgtggcgcgcgcggtgcacgattgcagccac
cgcagcgcaggccccttcgtcgcggtcaactgcggcgccattccggagaacctcatcgaa
gccgagttcttcggcgcgcgcaagggcgcctacaccggtgccaccaccgaccgcgaaggc
tatttccaggccgcgcgcggcggcaccttgttcctcgacgaaatcggcgacctgcccctg
gccatgcaggccaagctgctgcgtgtgatccaggaacgccgggtacgcgcgctcggcggc
gtgcaggaagaagccgtcgacgtgcgcctggtgagcgcgacccaccgcgacctcaatgcc
ctggtgcaatcgggccagttccgccaagacctgttctaccggctcaacgtgatcggtctg
cgcacgccgtcgctgcgcgaacggcgcgaagacctgcccagcctggtgagcgcgctgctg
gcccggctgtgcgccgaatccgggcagagcgtgcccgacctgtcgccacacgccttggcc
tggctgctcgcgcgcgacctgccgggcaatgtgcgcgagctcgaaaaccttttgcagcgc
gcgctcgcgttgagcagcggcgaaacccttgaacccgacgacttcggcgacaccgatcac
gccgccatcgagatcccgacgcagcccacgccgctggcgccggccgatcccgcgccgcgc
ccgcccgtctcgccgccccccgccgacatccccgccgacctgcaggcctatctcgacgaa
caggaacggcaggtgctgctcaaggccctgcgcgaaagcgatttcaaccgcaccgcagcg
gccgcccgcctcggcctgaacctgcgccagatgcgctaccgcatccagcgcctgggtatc
gtcatgccctcttcggacgatgacgaaaccccttga
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