KEGG   Hydrogenophaga sp. BPS33: F9K07_24595
Entry
F9K07_24595       CDS       T06379                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
hyn  Hydrogenophaga sp. BPS33
Pathway
hyn00300  Lysine biosynthesis
hyn00470  D-Amino acid metabolism
hyn01100  Metabolic pathways
hyn01110  Biosynthesis of secondary metabolites
hyn01120  Microbial metabolism in diverse environments
hyn01230  Biosynthesis of amino acids
Module
hyn_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hyn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    F9K07_24595 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    F9K07_24595 (dapF)
Enzymes [BR:hyn01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     F9K07_24595 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: QHE87848
LinkDB
Position
complement(5346035..5346937)
AA seq 300 aa
MHIRFTKMQGAGNDFVVLDETQGLLGLSAAQYRFLADRHFGVGADQILSVRASPREGLDF
EYRIHNADGGEVEQCGNGARCFVRYVHDKKLTTRNPVRVKVQNGELELHMHEDGRVTVDM
GAPVFALDRVPFNGEGLRPETMGRFERWPLALPYAGDVPVAVLSMGNPHAVLLVDDVDTA
PVASWGPWIESHERFPRRVNAGFLQVVSRHEVRLRVYERGAGETLACGTGACAAVVAGIR
LGLLDARVDVHTRGGVLTIEWRETPLHDQAVFMTGPATTVFDGDIDVPDLACSPANGCTK
NT seq 903 nt   +upstreamnt  +downstreamnt
atgcacatccgattcaccaagatgcaaggcgcaggcaacgactttgtcgtgctcgacgaa
acgcagggcctgctcggcctgagcgccgcgcaataccgcttcctggccgaccgccacttc
ggcgtgggcgccgatcagatcctgagcgtgcgcgcctcgccgcgcgaagggctggacttc
gaataccggatccacaacgccgacggtggcgaggtcgagcagtgcggcaacggcgcgcgc
tgtttcgtgcgctacgtgcacgacaagaagctgaccacgcgcaacccggtgcgcgtgaag
gtccagaacggcgaactcgaacttcacatgcacgaagacggccgcgtgacggtggacatg
ggcgcgcccgtgttcgcgctcgaccgcgtgcctttcaatggcgagggcctgcggcccgag
accatgggacgcttcgagcgctggccgctggcgctgccctatgcgggcgacgtgcccgtg
gccgtgctctccatgggcaacccgcatgccgtgctgctggtggacgacgtcgataccgcg
ccggtggcctcctggggaccgtggatcgaatcgcacgaacgttttccacgccgcgtgaac
gccggcttcctgcaggtggtaagccgccacgaagtgcgcctgcgcgtgtacgagcgcggt
gccggtgaaacgctggcctgtggcacgggcgcctgcgccgccgtggtcgccggcatccgc
ctgggtctgctggacgcgcgggtggacgtgcacacccgaggcggcgtgctcacgatcgaa
tggcgcgaaacgcctctgcacgatcaagctgttttcatgaccggcccggccaccaccgtg
ttcgacggggacatcgacgttcccgacctggcgtgcagccccgccaatggctgcacaaaa
tga

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