Hydrogenophaga sp. BPS33: F9K07_24595
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Entry
F9K07_24595 CDS
T06379
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn00300
Lysine biosynthesis
hyn00470
D-Amino acid metabolism
hyn01100
Metabolic pathways
hyn01110
Biosynthesis of secondary metabolites
hyn01120
Microbial metabolism in diverse environments
hyn01230
Biosynthesis of amino acids
Module
hyn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F9K07_24595 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F9K07_24595 (dapF)
Enzymes [BR:
hyn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
F9K07_24595 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QHE87848
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All DBs
Position
complement(5346035..5346937)
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AA seq
300 aa
AA seq
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MHIRFTKMQGAGNDFVVLDETQGLLGLSAAQYRFLADRHFGVGADQILSVRASPREGLDF
EYRIHNADGGEVEQCGNGARCFVRYVHDKKLTTRNPVRVKVQNGELELHMHEDGRVTVDM
GAPVFALDRVPFNGEGLRPETMGRFERWPLALPYAGDVPVAVLSMGNPHAVLLVDDVDTA
PVASWGPWIESHERFPRRVNAGFLQVVSRHEVRLRVYERGAGETLACGTGACAAVVAGIR
LGLLDARVDVHTRGGVLTIEWRETPLHDQAVFMTGPATTVFDGDIDVPDLACSPANGCTK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcacatccgattcaccaagatgcaaggcgcaggcaacgactttgtcgtgctcgacgaa
acgcagggcctgctcggcctgagcgccgcgcaataccgcttcctggccgaccgccacttc
ggcgtgggcgccgatcagatcctgagcgtgcgcgcctcgccgcgcgaagggctggacttc
gaataccggatccacaacgccgacggtggcgaggtcgagcagtgcggcaacggcgcgcgc
tgtttcgtgcgctacgtgcacgacaagaagctgaccacgcgcaacccggtgcgcgtgaag
gtccagaacggcgaactcgaacttcacatgcacgaagacggccgcgtgacggtggacatg
ggcgcgcccgtgttcgcgctcgaccgcgtgcctttcaatggcgagggcctgcggcccgag
accatgggacgcttcgagcgctggccgctggcgctgccctatgcgggcgacgtgcccgtg
gccgtgctctccatgggcaacccgcatgccgtgctgctggtggacgacgtcgataccgcg
ccggtggcctcctggggaccgtggatcgaatcgcacgaacgttttccacgccgcgtgaac
gccggcttcctgcaggtggtaagccgccacgaagtgcgcctgcgcgtgtacgagcgcggt
gccggtgaaacgctggcctgtggcacgggcgcctgcgccgccgtggtcgccggcatccgc
ctgggtctgctggacgcgcgggtggacgtgcacacccgaggcggcgtgctcacgatcgaa
tggcgcgaaacgcctctgcacgatcaagctgttttcatgaccggcccggccaccaccgtg
ttcgacggggacatcgacgttcccgacctggcgtgcagccccgccaatggctgcacaaaa
tga
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