Hydrogenophaga sp. BPS33: F9K07_26900
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Entry
F9K07_26900 CDS
T06379
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F9K07_26900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyn03400
]
F9K07_26900
Enzymes [BR:
hyn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
F9K07_26900
DNA repair and recombination proteins [BR:
hyn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F9K07_26900
Prokaryotic type
F9K07_26900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QHE88251
LinkDB
All DBs
Position
complement(5814783..5815514)
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AA seq
243 aa
AA seq
DB search
MQTGFDWGEPASAPRLTSANPSDWPVQPGWADLVSGFWASPQGKGLQQFLQGRLADGALV
YPPQPLRALDLTPPEAVRVVLLGQDPYHGPGQAEGLAFSVAPGVKVPPSLRNMLQELGRD
LSAPLPEGGSLVRWARQGVLLLNTSLTVEDGQPASHAGRGWETLTDAVIRHCNGAGDPKV
FLLWGAHAQKKASLIDVQRHLVLSANHPSPLSARRGPVPFVGCGHFGQANAWLSARGLKP
VAW
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaccggtttcgattggggggagcccgcgtcggcccctcgcctgacctccgccaac
ccatcggactggcccgtccagcccgggtgggccgatctggtgtccggcttctgggcgtcg
ccgcagggcaagggtctgcagcaattcctgcaagggcggttggcggacggcgcgctggtc
tatccaccccaaccgctgcgtgccctcgatctcacgccgcccgaggcggttcgcgtggtt
ctcctgggtcaggacccgtatcacggaccggggcaagccgaaggcctggcgttttcggtg
gcgccgggcgtcaaggtgccgcccagcctgcgcaacatgctgcaggaattggggcgcgac
ctttccgcgccgctgcctgagggcggctcgttggtgcgctgggcgcgccagggcgtgttg
ttgctcaacaccagcctgacggtggaagatgggcagccggccagccacgctggccggggc
tgggagacgctgacggatgccgtgatccgccattgcaacggggctggtgaccccaaggtt
tttctgctttggggcgcccatgcgcagaaaaaagcgtccttgatcgatgttcaacgccat
cttgtgctcagcgccaaccatccttcgccgttgtccgcccggcgcggcccggtccccttc
gtggggtgtggacatttcgggcaggccaatgcctggctgtctgcgcgggggctgaagccc
gtggcgtggtga
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