Hydrogenimonas sp. MAG: NNO_0129
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Entry
NNO_0129 CDS
T05789
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hyo
Hydrogenimonas sp. MAG
Brite
KEGG Orthology (KO) [BR:
hyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyo03032
]
NNO_0129
03400 DNA repair and recombination proteins [BR:
hyo03400
]
NNO_0129
Enzymes [BR:
hyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NNO_0129
DNA replication proteins [BR:
hyo03032
]
Prokaryotic type
DNA Topoisomerases
NNO_0129
DNA repair and recombination proteins [BR:
hyo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NNO_0129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Cas12f1-like_TNB
Zn_ribbon_recom
DUF7129
Zn_Ribbon_TF
Ogr_Delta
Toprim_4
DUF7573
DUF1272
DUF7575
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
BBG64831
UniProt:
A0A3G9GTJ9
LinkDB
All DBs
Position
complement(90656..92860)
Genome browser
AA seq
734 aa
AA seq
DB search
MKNLIIVESPAKARTIKNFLGKDYEVIASKGHIRDLPKHSFGIKFENNRFEPQYRVDKDH
SAIVKEIKELAGKSEKVYIATDEDREGEAIGYHIAKAIGKDPEKLPRIVFHEITKKAIEH
ALAHPRKINMDQVNAQQARRLLDRIVGYKLSPLLASKIQKGLSAGRVQSAALKLVVDRER
EIKAFKPVEYWSIDAVFKPEIAASLVEYKGKKIEKMTIKDAGEAREMESTLKAESYRVKS
IEKRERKSSTPPPFMTSTLQQSASGRLGYSPKKTMMLAQKLYEGVKTDKGQMGVITYMRT
DSLNIAEEAREAARETILKTFGERYLPKKPKIYSSKAKGAQEAHEAIRPTRLDFTPEIAA
KYLAADELKLYRLIYNRFLASQMADAILESQTILFASGHGTFKASGRKLVFDGFYRVMGY
DEKDNLLPELKEGEEAKLEKLAANRHFTEPPPRYSEASLIKKLESLGIGRPSTYAPTISI
LVSRDYIKIEKRQLIPTPIAFTVIETLEKYFPEIVDSNFTAQMEEKLDEVAERKEDWQKL
LLDFYEPFIEKVERGKKEIKSLKKAEPIGRECPECGSELLLRSGRYGDFIACANFPKCRY
TEAVEKEEKEGAARQQTTDEKCEKCGAPMVVKRGRRGSFLACSAYPKCKNTRSLEKPKTL
EVKCPECGGELLERDSRRGKFFGCSNYPKCTFISKFEPTEKECPECGYAMAKRTYRGKEV
YECIKCKHREDAEA
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaacctcataatagtcgaatcacccgccaaagcgagaaccatcaagaactttcta
ggcaaagattacgaagttatagcgtccaaagggcacatcagggatctgcccaaacacagc
ttcggcataaagttcgaaaacaaccggttcgagccgcaataccgcgtcgacaaggatcac
agcgcgatagtgaaggagataaaagagcttgccggcaagagtgaaaaggtatatatcgcg
acggatgaggaccgcgaaggcgaggctatcggctaccacatagcgaaagctatcggcaaa
gaccccgaaaagctgccgcgaatcgtctttcacgagataaccaaaaaggcgatcgagcac
gcactggcgcatccccgcaagatcaatatggatcaggtgaacgcccaacaggcgaggcgc
cttctcgaccgcatagtgggctacaagctctccccgcttctggcatcgaagatccagaaa
gggctgagtgcgggaagggtgcagtccgccgcactcaagcttgtagtcgaccgcgaacgg
gagataaaagctttcaagcctgtcgagtactggagcatagatgcggttttcaaacctgaa
atcgcagcctccctcgtagagtacaagggcaaaaagatcgaaaagatgacaatcaaagat
gccggcgaagcgagagagatggagtccaccctgaaagccgagagttaccgggtaaagagt
atcgaaaagagggagagaaagagctccactccgcctcctttcatgacctcgactcttcag
cagagcgcttccggacgcctcggatactccccaaaaaagacgatgatgctggctcagaag
ctctatgagggggtaaagaccgacaaggggcagatgggtgtcataacctacatgagaaca
gacagtctcaatatagccgaagaggcccgggaggccgcaagagagacgattttgaaaaca
ttcggcgagaggtaccttccgaaaaagccgaagatatacagttcaaaggccaaaggggcg
caggaggcgcacgaagcgatacgtccgacacgtctcgacttcacccccgaaatagccgcg
aaatatcttgccgctgacgagttgaagctatacaggctcatctacaaccgttttctggca
agccaaatggccgatgcgattctggagtcgcagacaattctcttcgcaagcgggcacggc
acattcaaggctagcggacgaaagcttgttttcgacggcttctacagggtcatgggctac
gacgagaaagacaaccttctgccggagctgaaagagggcgaagaggcgaagctggaaaaa
ctggccgcgaaccgccacttcaccgagccgcctccgcgctacagcgaggctagtctcatc
aagaaactggagtctctcggcatagggcgtccgagcacctacgccccgaccatatccatt
ctggtatcgcgtgactacataaagatagagaagcgccagcttatcccgacccccatagcc
ttcacggtcatagagacactggagaagtactttcccgaaattgtcgactcgaactttacg
gcacagatggaggagaagctggatgaggtggccgaacgcaaagaggattggcagaagctg
ctgctcgacttctacgaacccttcatcgagaaggtggagaggggcaaaaaggagatcaaa
agcctcaaaaaggctgagcctatcggcagagagtgccctgaatgcggcagcgagcttctg
ctgcgcagcggacgttacggcgacttcatagcttgcgccaacttccccaagtgccgctac
accgaggcggtggagaaggaggagaaagagggcgcggcccggcagcagacaaccgacgaa
aagtgcgaaaagtgcggtgcaccgatggttgtaaagagaggcaggaggggctctttcctg
gcttgcagcgcctacccgaaatgcaaaaacaccagatccctggagaagcctaaaactctc
gaagtcaaatgcccggagtgcggaggagagcttctggagagagactcgagaaggggcaaa
ttcttcggatgctccaactaccccaagtgtaccttcatatcgaaattcgagccgaccgaa
aaagagtgcccggagtgcggctatgcaatggcgaaacgcacataccgcggtaaagaggta
tacgagtgcataaagtgcaaacacagagaagatgcggaagcctaa
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