Hydrogenimonas sp. MAG: NNO_0437
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Entry
NNO_0437 CDS
T05789
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hyo
Hydrogenimonas sp. MAG
Pathway
hyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NNO_0437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyo03019
]
NNO_0437
03016 Transfer RNA biogenesis [BR:
hyo03016
]
NNO_0437
Enzymes [BR:
hyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NNO_0437
Messenger RNA biogenesis [BR:
hyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NNO_0437
Transfer RNA biogenesis [BR:
hyo03016
]
Prokaryotic type
tRNA degradation factors
NNO_0437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BBG65140
UniProt:
A0A3G9H4N9
LinkDB
All DBs
Position
395914..398118
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AA seq
734 aa
AA seq
DB search
MVCRFEFEMNNRKTVFETGKVARQANGSVILKSGKTVLLATAVMDDKPIDEHFLPLTVQY
IEKSYAAGKIPGGFIKRETKPGDFETLTSRLIDRSLRPLFPKGFYNPVQITVMLLSVDEN
ADLQSLALDAASAALFISDIPVSRSVAGVRIGRKEGSFVLNPSLEELEEGSLDLFVSGTK
EDLLMIEMRAIGSVEVEIEPSVAIDPMLDPMLADEIIQVPHVNELKEEELIEAIEMAQKA
IETAASEYEKVFSEAAKPKKSVPLFDEKADPSIVTYVKEFYLDDINRALGGMAKSERGTE
IKAIVEQVLSDDTAVKEEWTEDQVKAAVSEVKRERVRSMIVDEGRRADGRGLKDVRPISI
ETNLLPSVHGSCLFTRGETQALVTCTLGSRQDAQMFERITGKNASYEEFMVHYNFPGFSV
GEASRIGPPGRRELGHGNLAKRALEPVLDKTQLDSIIRLVSEILESNGSSSMATVCGGSL
ALKAADVPVLKLIAGVAMGLVSENGKNAILTDIMGLEDHDGDMDFKVAGSEDGITALQMD
IKLGGISLDLLKEALEQAKEARLHILGIMKEAAEKIEVNEEVLPSSEVFHVEPHKIVDII
GQAGKTIKEIIEKFEVSVDLDRKEGEVRVAGPSKAKVKAACDHIKTLTEGGAAKKEIPQF
EIDKPLKGKVKKLVDFGAFVELPGGVDGLLHISKISKRRISHPSDVLHEGQEIEVVVKSQ
QGHKISLEPAKPLD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggtttgcagatttgaattcgagatgaacaataggaaaacggtatttgagaccggaaaa
gtcgcgaggcaggcaaacggctccgttatattgaaaagcggtaaaactgtactgctcgcg
acagccgttatggacgacaagccgatagatgagcattttctgcctcttacggttcagtat
atcgagaagagttacgcagccggaaagataccgggaggtttcattaagcgcgagaccaag
cccggggatttcgagacgctcacatccaggctgatagaccgctcgctgcggccgctcttt
ccgaaaggtttctacaaccctgtacagattaccgtgatgctgctgagcgtagacgaaaat
gccgacctccagtcccttgctctggacgccgcatcggccgcacttttcatctcggatatt
cccgtctccagaagtgtcgcaggtgtgcgaataggtcgtaaagaggggagtttcgtactc
aacccgagtctagaagagctggaagaggggagcctcgatctgttcgtctccggtacgaaa
gaggatcttctgatgatcgaaatgagagccatcggcagcgtggaggtggagatagagccg
agtgtggccatagatcccatgctcgaccctatgcttgccgatgagatcatccaggttccg
catgtaaacgaattgaaagaggaggagctcatcgaagccatagagatggctcaaaaggct
atcgaaacggcagcttccgagtatgagaaggtcttctcggaagcggcaaaacccaaaaag
agtgtgccgctgttcgacgaaaaggccgatccttcgatcgtcacctacgtaaaagagttc
tatctcgacgatatcaacagggcacttggaggtatggcgaaaagcgagagaggcacagag
ataaaagccatagtcgagcaggttttgagtgacgatacggccgtgaaagaggagtggacg
gaagatcaggtaaaagcagccgtatccgaagtcaaacgcgagcgtgtaagatctatgatc
gtcgacgaaggcaggagagccgacggaagggggctcaaggatgtacgcccgatctcgata
gagacaaatcttctgccgagcgtccacggctcctgcctctttacgcgcggtgaaacccag
gcgcttgtaacgtgtacactcggtagtcgacaggatgcacagatgttcgagcgcataacc
ggcaaaaacgccagctatgaagagttcatggtccactacaactttccgggattcagcgta
ggcgaagcttcacgcataggacctccgggccgacgtgaacttggccacggaaacctggcg
aaaagggcactggaaccggttctggacaagactcagctcgattccataatccggctcgta
tccgagatactcgaatcgaacggctcatcctccatggctaccgtctgcggcggctccctg
gcactcaaagcggccgacgttcctgtactcaaactgatagcgggcgtggcaatgggccta
gtctcagaaaacggtaaaaatgcgatactcaccgatatcatgggcctggaagatcatgac
ggagatatggatttcaaagttgccggaagcgaagatggaataacagcccttcagatggat
ataaaactgggggggatcagcctggatctgctgaaagaggcgctggagcaggcgaaagag
gcaagactccatatcctcggcataatgaaagaggccgccgaaaagatagaggtcaatgaa
gaggtgcttccgagcagtgaagtctttcatgtggagccgcacaagatcgtagacataata
gggcaggccggaaagaccataaaagagataatagagaagttcgaagtgagtgtagacctc
gaccgaaaagagggtgaagtaagggtggcaggcccgagcaaagcaaaggtaaaggctgcc
tgcgaccatataaaaacacttaccgaagggggcgctgccaaaaaagagataccgcagttc
gaaatcgacaagccgctgaaaggaaaagtgaaaaaactggtggatttcggtgctttcgta
gagctgccgggaggagtagacggactgcttcatatctcaaaaatctcaaaaagaagaatc
tcccacccgagcgacgtactgcacgaagggcaggagatagaggtggtagtcaagtcacag
cagggacataagatttcgctggagccggcgaagcccctcgattaa
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