Hydrogenimonas sp. MAG: NNO_0872
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Entry
NNO_0872 CDS
T05789
Name
(GenBank) hydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hyo
Hydrogenimonas sp. MAG
Pathway
hyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NNO_0872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyo03019
]
NNO_0872
Messenger RNA biogenesis [BR:
hyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NNO_0872
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GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
MurD-like_N
KhpA-B_KH
UPF0242
Helo_like_N
Motif
Other DBs
NCBI-ProteinID:
BBG65575
UniProt:
A0A3G9GXS6
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Position
847890..849458
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AA seq
522 aa
AA seq
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MLTEILIGGAAAAVSGVAAFFITRKIDASKYDIYVEQARAKAKAIEHEAEVVLQNAKLKV
AEAELEAKQKYEEEIKRVNSEFNARMAQLEKREEALTYRLENELKQAAEEKEEIKKEKAE
LKLIHERLESLKREYEQKRKEALKILERASGLTDEEARELVLKEAEKEARGEIAHIVRKY
EAEAKVEAKRKANYILAQATTRYAGDFAAERLINVVHLPDDELKGRIIGKEGRNIKTLEM
LLGVDIIIDDTPGAIILSSFNLYRRAIATRTIELLIEDGRIQPARIEEIYERVTEEFEQK
VLEEGEQIVVDLGLSSMHPEIVKLIGRLRYRASYGQNALGHSLEVAHLAGIMAAEMGGDD
VLARRAGILHDIGKALTHEYAGSHVDLGAEICKRYKEHPVVINAIYAHHGHEEPESVESA
AVCAADTLSAARPGARREVLESFLKRVKEIEEIATSKPGVHHAYAINAGREVRVIVNASL
INDDEAVLLSKEISEDIEKSVQYPGEIKVNVIRETRAINYAR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgttgacagagattttgataggaggtgccgcagcagccgttagcggagttgcagcattt
tttataacgagaaagatagacgcttccaagtacgatatatacgtagagcaggccagggcg
aaggccaaggcgatagagcacgaagcggaggtggttcttcaaaacgccaagctgaaagtc
gccgaagccgagctggaagcgaagcagaagtatgaagaggagattaagcgggtcaacagt
gagttcaacgcccgcatggcacagttggagaagagggaggaggcgctcacctacagactc
gaaaacgagttgaaacaggcggccgaagagaaagaggagataaaaaaggagaaggccgaa
ctcaagctgattcacgagaggctggagtctctgaaaagagagtatgagcagaaacggaaa
gaggcgctgaagattctcgaacgtgcatccgggcttacggatgaagaggctcgtgagctg
gtacttaaagaggcggagaaagaggcacggggagagatagcccatatagtgcgaaaatat
gaagctgaagcgaaggtggaggcgaagcgcaaagccaactatatacttgcccaggctacc
acgcgctatgcaggggattttgccgcggagcgactcataaatgtcgttcatcttccggat
gacgaactgaaggggcgcattatcggaaaagagggtcgcaacataaagactctcgagatg
cttctcggcgtagatataattatagacgatactcccggtgccataattttgagcagcttc
aacctctaccgccgtgctatagccaccagaaccatagagcttcttatcgaagatggcagg
atacagcccgcccgcatagaggagatatacgagagagttaccgaagagttcgaacagaag
gtgcttgaagagggggaacagattgtagtggatctgggactctcgtcgatgcatcctgag
atcgtcaaactcataggcaggttacgctaccgtgcaagttacgggcagaatgcgctgggt
cactctctggaggtcgcacacctcgccgggatcatggccgccgagatgggaggagatgac
gtactggccaggcgcgccggaatacttcacgatatcggcaaggcgctgacgcacgagtat
gcgggaagccacgtagatctcggtgccgaaatatgcaaacgctacaaagagcacccggta
gttataaacgccatatatgcccaccacggccatgaagagcccgaaagcgtcgagtcggcc
gccgtatgtgccgcagatacactctcagccgcaaggccgggtgcgagacgcgaagtgctg
gagagcttccttaaaagggtgaaggagatcgaagagattgcgacatccaaaccgggagtt
catcacgcctacgccataaacgcaggccgggaggtgagggttatcgttaacgcttcactc
ataaacgacgacgaagccgtactcctaagcaaagagatttcggaagatatagaaaaaagt
gtacaatatccgggcgagataaaggtgaatgttatccgagagacacgggcgatcaactac
gccagatag
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