Hydrogenimonas sp. MAG: NNO_0976
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Entry
NNO_0976 CDS
T05789
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hyo
Hydrogenimonas sp. MAG
Pathway
hyo03420
Nucleotide excision repair
hyo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NNO_0976
03430 Mismatch repair
NNO_0976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyo03400
]
NNO_0976
Enzymes [BR:
hyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NNO_0976
DNA repair and recombination proteins [BR:
hyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NNO_0976
MMR (mismatch excision repair)
Other MMR factors
NNO_0976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
Viral_helicase1
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
BBG65679
UniProt:
A0A3G9GV98
LinkDB
All DBs
Position
952255..954321
Genome browser
AA seq
688 aa
AA seq
DB search
MPLSKLNKEQLEAARAPFGHNLVIASAGTGKTSTIVGRIAYLLKEGVDPKEILLLTFTNK
AAAEMVERIAGFFNRNVAASIEAGTFHAVSYRHLKREKREINLKQPFELKTLFRSIYDKR
RFHHIAAEVEPFAANFLYDLYSLFQNASSEPFDLWLPKRHPGHEPFTDIYLDIIDEFKST
KREFGFVDFNDLLILMRESVAEKPLPFKEILVDEYQDTNELQGSLIDAMDAGSLFCVGDY
DQSIYAFNGANINIIGSFGRKYGDAKIFTLTKNYRSTAPILDLANRVIEHNERIYPKQLE
VVRGSESASMPRLMIFDNLMQQYEAISQAIRRSMTPHAEIAVIFRNNASADGIEAMLKEE
GIACRRKGGRSFFDAKEVKAALDLATLLANPKDMMAFIHIFEYARGIGSATAKELFEGFS
VLGDGDMIRGLFRPKPMTNPFKARSTNYQLGLFDHPMQIGSVSRFSHLGLDENFMAHPIL
KHPALNSDGVKFLYDFYRLMSSLKNIRQPQSIMRSILSSEIYRFITDRLAESRATLKNGE
VDGTKKEEALERIKRKGVLLVRLAQAYNSNEKFINAMVLGGRELSEGEGVNLLTVHASKG
LEFDEVYVIDLMDGRFPNRKLAGQGGSIEEERRLFYVAVTRAKNRLFLSYAKYDSFKDVT
FFPSQFLYEAGLLKKDRVYEKLKALSGP
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcctctatctaaactgaacaaagagcagttggaagcggccagggcgcctttcgggcac
aacctggtgatagcatctgccggaacaggaaagacctctacgatcgtcggccgcatagca
tacctgctcaaagagggggtagacccgaaagagattttgctgctaaccttcacgaacaaa
gccgccgcggagatggtagagcggatagcaggctttttcaaccgtaatgtggcagcttcg
atagaggccgggactttccatgcggtgagctaccggcacctcaaaagagagaagagagag
atcaacctaaagcagcctttcgagctaaagaccctcttccgaagcatctacgataaacgg
cggtttcaccatatagccgcagaagtagagccgttcgccgccaattttctctacgatcta
tactcccttttccagaatgcctcttctgagccgttcgatctctggcttcccaaaagacat
cccggacacgagccttttacggatatctacctcgatatcatagatgagttcaaaagtacg
aagagggagttcggtttcgtagatttcaacgaccttctgatcctgatgcgtgaatccgta
gccgagaagcctcttcctttcaaagagattctagtggacgaatatcaggatacgaacgaa
ctgcagggctctttgatagatgccatggacgccgggtcgctcttttgtgtcggggactat
gatcagagtatatacgccttcaacggtgcgaatataaacattatcggctcgttcggcagg
aagtacggcgatgcgaagatctttacgctcacaaagaactaccgctctacagctcccata
ctcgacttggccaaccgcgtcatagagcacaacgagcgtatctaccccaagcagttggag
gtggtaagaggcagcgagagcgcttcgatgcccagactcatgatattcgacaaccttatg
cagcagtacgaggctatatcgcaggcgatccggcgctccatgactccgcacgcagaaata
gcggtgattttcaggaacaacgcgtcggcggacggaatagaggctatgctcaaggaagag
ggcatagcctgcaggcgcaaagggggcagaagctttttcgacgccaaggaggtgaaggcc
gctttggacctggccacgcttctggccaacccgaaagatatgatggcgttcatacatatc
ttcgaatatgccaggggaatcggcagtgctacggcaaaggagctttttgaggggttctct
gttctgggtgacggcgatatgataagaggtcttttccgtccgaagccgatgacaaacccc
ttcaaagcccgcagtaccaactatcagctaggcctcttcgaccatccgatgcagatagga
tctgtttctagattctcccatctcggactcgatgagaacttcatggcgcatcctatactg
aagcatccggcactcaacagcgacggggtgaagtttctatatgacttctaccgacttatg
agctctctgaaaaatattcgacagccgcaatctatcatgagatcgattctctcttcggag
atataccggtttattacagaccggctcgccgaatcaagggccaccctgaaaaacggtgag
gttgatggtacaaaaaaagaggaggctctcgagaggataaagcgcaagggggttttgctg
gtgcgtcttgcgcaggcgtacaacagcaacgaaaagtttatcaatgccatggtactggga
ggaagagagcttagcgaaggcgagggtgtaaacctgctgacggttcatgcgagtaaaggg
ctggagttcgatgaggtctatgtgatagatcttatggacggaaggtttccaaacaggaag
cttgcggggcaggggggaagtatcgaggaggagaggaggctcttttatgtggctgttaca
agggcgaaaaaccgcctcttcctatcctacgcgaaatatgacagcttcaaagatgtcaca
ttcttcccttcccagtttctgtatgaggccggtcttttgaaaaaagaccgggtctacgag
aagctcaaagcccttagtggcccttga
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