Hydrogenimonas sp. MAG: NNO_1422
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Entry
NNO_1422 CDS
T05789
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hyo
Hydrogenimonas sp. MAG
Pathway
hyo03030
DNA replication
hyo03430
Mismatch repair
hyo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NNO_1422
03430 Mismatch repair
NNO_1422
03440 Homologous recombination
NNO_1422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyo03032
]
NNO_1422
03400 DNA repair and recombination proteins [BR:
hyo03400
]
NNO_1422
Enzymes [BR:
hyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NNO_1422
DNA replication proteins [BR:
hyo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NNO_1422
DNA repair and recombination proteins [BR:
hyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NNO_1422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
T2SSK
IF-2
tRNA_anti-codon
DUF7216
Motif
Other DBs
NCBI-ProteinID:
BBG66125
UniProt:
A0A3G9GYV2
LinkDB
All DBs
Position
complement(1408557..1412126)
Genome browser
AA seq
1189 aa
AA seq
DB search
MRPAFTHLHLHTEYSLLDGANKISKLAGRLKELGMESVAITDHGNMFGAIDFYQQMKREG
IKPIIGMEAYIHNHDDIGDKSTRQRFHLCLYAKNETGYKNLMYLSSQAYINGFYYYPRIN
KKILREHSEGLICSSACLQGEVNWHLNLSERNVKFGALGYERAKEVALEYREIFGDDFYL
ELMRHGIGDQHSIDEHVIRLSLETGIKIVATNDTHYLYPDDAEAHEAFMCIAMNKLYDDP
DRLRHSVHEFYLKSPEEMAALYADIPEALESTQEIAEKCNLELDLGNPTPPNFKFAREYA
ANVGLSVPEPDEQNSFANDEALFVHECRRGLEERLKFVDPQKHGEYRERLETEMRIINQM
KFPGYMLIVWDFVREAKERGIPVGPGRGSAAGSLVAYSLGITNIDPMKYDLLFERFLNPE
RVSMPDIDMDFCQARRGEIIDYVVEKYGRYNVAQVITFGSLLAKGVIRDVARVLGVSYAE
ADKMAKLIPDELGITLNGKGREGEEGFKPGAFQKEPKLRELIETNPTAARVWRFALALEG
LKRNAGMHAAGVVISNEELWHKTPLYKPSGEETLVTQYSLNFLEDVDLIKFDFLGLKTLT
VIDNAVKLIEKRHGVKIDLDNMPVDDKKVYETIRSGETVGMFQIESGGMQQLNSKLKPDN
FEDLVAVLALYRPGPMESGMLDDFIERKHGRQQITYMFPQLEEILKPTYGVIVYQEQVMQ
IVQTIGGFSLGKADIVRRAMGKKKFDLMQKYKSEFAQGAKDQGLDYDKAAELFDLIEKFA
GYGFNKSHSAAYAMVTYQTAYLKTHYPAEFMAALLTSEKDNTDKVVKYIDETKRLGIELL
APDINRSALEFTPDRDSEKGKDVILFGLGAIKGVGDAAVNAILKAREEGSFESLDDFVSR
IDTQKVNKKVIESMIKAGALDGFGYSRRALLESIEAIIEAMHESARAQQMAVGSLFGDAE
EMVSVKVEIVPMDEYDQKSILELEKESLGFYVSGHPLDRFREELSKIEYTLSSDIDQIED
GSGALLIGKVEEVVTKISKKGNRFGIANVMDLHGNIEITLFERQLEQLEKMDLDEPVGFK
VSISRDGDFTRMRVHKILELKACRKEKVDTRMVEKPEEPMIVRLDLSHEKMRILEEIYRL
ARSHPGRKPLKLLLSSKLQEVEIESSVFVDEQIKAALERLEEVEVFASA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgagacctgcttttacccatctacatctgcataccgaatattcactgcttgacggtgcg
aacaagatatcgaagcttgccggacgtctgaaagagctgggaatggagtctgtcgccatt
acggaccacggcaacatgttcggagccatcgatttctaccagcagatgaaaagagagggc
atcaagccgattatcgggatggaagcctatattcacaaccatgacgatataggtgacaag
agtacgcggcagcgttttcacctctgcctctatgccaaaaacgaaacaggctacaaaaac
ctgatgtatctaagttcgcaagcgtacatcaacggcttctactactatccgagaataaac
aagaagattctgagagagcatagcgaggggcttatctgctcatccgcctgtcttcagggg
gaggtgaactggcatcttaatctgagtgaaagaaatgtcaagttcggggcgctcggttac
gagagggcgaaagaggtggcgctggagtatagagagattttcggcgacgacttctacctg
gagctgatgcgccacggaataggggatcagcactccatagacgagcatgtcataagattg
agcctggagaccggcatcaagatcgtagccacaaacgatacacactacctctacccggat
gatgcggaggcccatgaggcgttcatgtgtatcgcgatgaacaaactctatgacgatccg
gacaggctgaggcactccgtccacgagttctacctgaagtctccggaagagatggcggcc
ctttatgccgacatacccgaagcgctggagagtacacaggagattgccgaaaagtgcaac
ctggagctcgacctcggcaaccctactccaccaaatttcaaatttgcccgcgaatatgcg
gccaatgtgggtctgagcgttcccgagcccgatgagcagaacagcttcgcaaacgacgaa
gcgctcttcgtgcacgagtgcaggagggggctggaagagaggctgaagttcgtagatccg
cagaagcatggggagtacagggagcgtctcgaaactgagatgcgtataataaaccagatg
aagtttccgggctacatgctgatagtctgggatttcgtaagagaggccaaagagcgggga
attcccgtcggtccggggcgggggtcggccgccggaagccttgtcgcctactcgctgggt
atcacgaacatcgacccgatgaagtatgaccttctcttcgagcgcttcctgaacccggag
cgtgtaagtatgcccgatatcgatatggacttctgccaggcgcgaagaggggagatcata
gattatgtagtcgagaagtacggccgctacaatgtcgcccaggtcataacgttcggttcg
ctcctcgccaagggagtcatacgcgatgtagcgagggttctgggtgtaagctatgccgaa
gcggacaaaatggccaagctcataccggacgagctggggatcaccctcaacggcaaaggg
agagagggggaggagggcttcaagcccggtgccttccagaaggagccgaaactgcgggag
ctcatagagaccaaccctacggctgcacgtgtctggagattcgcgcttgcactcgaaggg
ctcaagagaaatgccgggatgcatgccgccggcgtggtcatttcgaacgaggagctgtgg
cacaaaacacctctctacaagccctccggtgaagagacgctggttacccagtattcgctg
aacttcctggaggatgtcgaccttatcaagttcgactttctcggcctcaagacattgacg
gtcatcgataatgcggtcaagctgattgagaagagacacggcgtcaagatagatctcgac
aatatgccggtcgatgacaaaaaggtgtatgagacgattagaagcggcgaaacggtcgga
atgttccagatcgaatctggaggtatgcagcagctcaactccaagctgaaaccggacaac
ttcgaagatcttgtggcggtgcttgcactctaccgtccggggccgatggagtccggtatg
ctcgacgatttcatagagagaaagcacggccgccagcagatcacatacatgttcccgcag
ctcgaagagatactgaagcccacatacggagtcatcgtataccaggagcaggttatgcag
atagtccagacgataggcggcttcagtctgggtaaagccgatatcgtccgtcgtgcgatg
ggtaagaagaagttcgacctcatgcagaagtacaagagcgaattcgcccagggggccaaa
gatcaggggctcgactacgacaaggcggcagaactcttcgatcttatcgagaagttcgcc
ggttacggcttcaataagtcccactccgccgcatatgcgatggtcacataccagacggca
tacctgaagacccactatccggccgaattcatggcggcactgctgacaagcgaaaaagac
aatacggacaaagtggtcaagtatatagatgagaccaagaggctgggtatagagcttctg
gcacccgatataaaccgttcggctctggagttcacaccggacagagattcggaaaagggg
aaggatgtaatccttttcggtctcggggcgatcaaaggcgtgggggatgccgccgtaaac
gcgatattgaaggccagagaggagggctctttcgagtccctggacgattttgtctcgcgt
atcgacacccagaaggtcaacaagaaggtcatagagtctatgatcaaagcgggtgcgctt
gacggcttcggatatagcagacgcgctctgctggagtcgatcgaagcgataatagaggcg
atgcacgaatcggccagggcgcagcagatggccgtgggatcgctcttcggggatgcagag
gagatggtcagcgtaaaggtggagatcgttccgatggatgagtatgaccagaagagtata
ctcgaactcgagaaagagtctctgggcttttatgtctccggccatccgctcgaccgtttc
agggaggagctttcgaaaatagagtacactctctcatcggatatagaccagatagaggat
gggtccggcgctctgcttataggcaaggtggaggaggttgtgaccaagataagcaagaag
ggcaacaggttcggaatcgccaatgtgatggacctccacgggaacatagagataacgctt
ttcgagcggcagttggagcagctcgagaagatggatctggacgaacctgtcggtttcaag
gtctccataagcagggacggcgactttacccgcatgagagtccacaagatactggagctt
aaggcgtgccggaaagagaaggtagataccaggatggtcgaaaagccggaggagcccatg
attgtgcggctcgatctaagtcacgaaaagatgcgtattctggaagagatatacaggctg
gcccgctcacatccggggagaaaaccgctgaagcttcttcttagttcgaagcttcaggag
gttgagatagagtcgtcggttttcgtagatgagcagataaaagcggcgctggagcggctg
gaggaggtcgaagtcttcgcctcggcataa
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