Hydrogenimonas sp. MAG: NNO_1865
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Entry
NNO_1865 CDS
T05789
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hyo
Hydrogenimonas sp. MAG
Pathway
hyo03420
Nucleotide excision repair
hyo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NNO_1865
03430 Mismatch repair
NNO_1865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyo03400
]
NNO_1865
Enzymes [BR:
hyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NNO_1865
DNA repair and recombination proteins [BR:
hyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NNO_1865
MMR (mismatch excision repair)
Other MMR factors
NNO_1865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
eIF3_p135
PcrA_UvrD_tudor
CarD_TRCF_RID
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BBG66568
UniProt:
A0A3G9HJ24
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All DBs
Position
1896794..1898839
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AA seq
681 aa
AA seq
DB search
MDKILEELNQQQREAARHIDGPLLILAGAGSGKTKTITSRLAYLLSLGIDPANTLTLTFT
NKAASQMRERALSMIENPVYPPLLCTFHKFGLLFLKFNIERLERKNDFIVIDTDDKKRIV
KQISKELPTPLVASEISRYKNSLIDPDQAVEQAEHPNYKTISRIYKIYQEYLEENNLVDF
DDLLMLTYKILDKDEDIRKSISERYRYIMVDEYQDTNELQLQLLKKLCHSHTNLCVVGDD
DQSIYGWRGANIKNILEFSNMFEGTKVVKLENNYRSTEEILSAANLLIQHNRGRLGKRLI
STKGRGEPVTLFQSHDENEESDKIARAIKQLIDSGVPAGEIAVLYRINALSRSLEEGLNR
AGVAYQLVGGVRFYERAEIKDAISYLRIIANSHDDFSFKRVINRPKRGIGKATIDKIERA
AFERRQSLYQFLAETPKSELSKLLSKKAYASINRFINDLEILQETLERSTMEFIEMLEPT
IGLKEYYASMPDGMERVLNLDEFYGLFRDMVKKSPDMSLDAFLNEISLQSEQDQIKGEQI
SIMSVHASKGLEFRHLFVIGMEEEFFPLLGDGCDIEEERRLGYVAMTRAKESLTLSTVQS
RFHKGRRKQLEKSRFLTEAGLLEGSLVIEKSVGYKKGDLVKHKLFGIGRVLGVSRAGRDF
KLQINFGGDRREILSSFVEKV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggataagatattggaagaactgaaccagcagcagcgtgaagcggcccgtcatatcgac
ggacccctgctcattcttgccggggccggcagcgggaagacgaagaccatcacatcccgc
ctggcctatctgctctctttgggaatagatccggcaaatacgctcacactcaccttcacc
aacaaagcggcctcgcagatgagggagagagccctctccatgatagagaacccggtatac
ccgcctcttctgtgcaccttccataaattcggtctcctctttctgaagttcaatatcgag
agactggaacggaaaaacgacttcatagtcatcgacactgacgacaagaagagaatcgtc
aaacagataagcaaagagctccctacaccgctggtggcgagcgagatatccagatacaaa
aactctctcatagatcccgatcaggcggtggagcaggccgaacatccgaactacaagacg
atatcgagaatctataaaatctaccaggagtacctcgaagagaacaaccttgtcgatttc
gacgaccttctcatgctcacctacaaaatcctggacaaagacgaagatatcagaaagagc
atcagcgaacgctacaggtatataatggtagacgagtaccaggataccaacgaactgcag
ctgcagctgctaaaaaagctctgccactcacatacaaacctatgtgtagtcggggacgac
gaccagagcatatacggctggaggggcgccaacataaagaacatactggagttctccaac
atgttcgaaggcacgaaagtggtgaaactggagaacaactaccgctccaccgaagagatt
ctctcggcggcgaaccttctcatccagcataaccgcggaaggcttggaaagaggctgatc
agcacaaaagggagaggtgaaccggtaacactttttcagagccatgacgaaaacgaagag
tcagacaagattgcccgtgctataaagcagctgatcgatagcggtgttcctgccggcgaa
atagcggttctataccgtataaacgccctctcccgctcccttgaagaggggctcaaccgt
gcaggcgtagcctatcagctcgtagggggtgtacgcttctatgaacgggcggagatcaaa
gatgccataagctacctacgcatcatagccaacagccacgacgacttcagcttcaaaagg
gtgataaacaggccgaaaaggggaataggcaaagcgaccatcgacaagatagagagggcg
gccttcgaacggcggcagtcgctctaccaattccttgccgaaacaccgaagtcggagctc
tccaagcttttgagcaaaaaagcctacgcctcaataaacaggttcataaacgacctggag
atactgcaggagacactggagcgctccactatggagtttatagagatgctggaacctaca
atcggcctaaaagagtactacgcctccatgcccgacggaatggagagagtgctcaacctc
gacgagttctacggcctgttccgcgatatggtgaagaagagccccgatatgagcctggac
gccttcctcaacgagatatctcttcagagcgagcaggaccagataaagggggagcagata
tccatcatgagtgtccacgcttcgaaggggctggagttcaggcaccttttcgttataggt
atggaggaggagttctttccgctccttggagacggctgcgatatagaagaggagcgaagg
ctcggctacgtggcgatgacgagagccaaagagagccttacactctcgacggtacagagc
agatttcacaaagggcgcaggaaacagctggagaagagccgcttcctgacagaagcgggg
ctgctggagggctctttggtcatcgagaaatcggtaggatacaaaaaaggggatctcgtg
aagcacaaactcttcggtatcgggcgtgttctcggcgtctcacgtgccgggagagatttc
aaactccagataaacttcggcggcgacaggagggagattctctcctcgttcgtcgaaaag
gtctga
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