Hydrogenimonas sp. MAG: NNO_1939
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Entry
NNO_1939 CDS
T05789
Name
(GenBank) uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hyo
Hydrogenimonas sp. MAG
Pathway
hyo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NNO_1939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyo03400
]
NNO_1939
Enzymes [BR:
hyo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NNO_1939
DNA repair and recombination proteins [BR:
hyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NNO_1939
Prokaryotic type
NNO_1939
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBG66642
LinkDB
All DBs
Position
complement(1964282..1965001)
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AA seq
239 aa
AA seq
DB search
MRAALFDVDPQWREALEESYAALSPEYRDFVEKGSYIPRRCDIFNAFKTLPKSSLRYILF
GQDPYPRAESATGYAFIDGAVEGIFSPTGLHKSVNRATSLRNFVKMALVAEGRLGEDDLS
QEAVARVDRSDLIESVAELRENFESEGVLLLNAALLFEDKKSSRRHAKEWRPFMATLLRH
IDKDTKLILFGSIAKEIERIPEAGKFEQITLEHPYNHTFVLNPKAHELFGPMHLLRKRV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcgctgttcgatgtggacccgcagtggcgggaggctctggaggagtcgtat
gcggccctctccccggagtacagggattttgttgaaaaagggagctatatcccgagacgt
tgcgatattttcaacgcattcaaaacccttccgaaatcttctctgcgctatatccttttc
ggacaggacccgtatccccgggccgagtcggcaaccgggtacgcctttatagacggcgcg
gttgagggcatattctctccgacgggacttcataaaagcgtcaacagggccacaagcctt
cgcaacttcgtgaagatggcgctggtcgccgaagggaggctgggagaggatgacctttca
caggaggccgtggcccgggttgaccgcagcgacctgatagagagtgtggccgaacttagg
gagaatttcgaatcggaaggggtactgctgctcaacgccgcactacttttcgaggacaaa
aagtcatccaggcgccatgcgaaggagtggcggccgtttatggcgacactccttcgccat
atcgacaaagatacgaaactgatacttttcggttccatcgcgaaggagatagagaggatt
cccgaagccgggaaattcgagcagataacactggagcatccctacaaccacacattcgtt
ctgaaccccaaagcccatgaacttttcggaccgatgcacctactgcgcaaaagagtgtaa
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