Hydrogenimonas sp. MAG: NNO_1996
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Entry
NNO_1996 CDS
T05789
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hyo
Hydrogenimonas sp. MAG
Pathway
hyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NNO_1996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyo03019
]
NNO_1996
Enzymes [BR:
hyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NNO_1996
Messenger RNA biogenesis [BR:
hyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NNO_1996
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
AAA_22
UvrD-helicase
HEM4
Motif
Other DBs
NCBI-ProteinID:
BBG66699
UniProt:
A0A3G9GXD1
LinkDB
All DBs
Position
complement(2031226..2032485)
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AA seq
419 aa
AA seq
DB search
MSFKALNLNPRIMRAVEEEGYTEPTPIQAEAIPAILDGEDLLAAAQTGTGKTAAFTLPML
QKFSDKKGEGRRYVRALVLTPTRELAAQVHQSVRTYGKYLKLKSAEVYGGVSLHPQTRAL
RNGVDILVATPGRLLDHLNQRNVDLSRVEILVLDEADRMLDMGFINDIKKIIAELPHFRQ
NLLFSATFSEEIKRLSKTILKEPRMIKVAADNTTADRIKQTIHPVDRVKKADLLSHLIGT
NNWKQVLVFTRTKHGADKLSRRLAQDGLPSTSIHGNKTQAARMKALKAFKDGRVRVLVAT
DVAARGIDIDRLGQVVNFDLPEVAEDYVHRIGRTGRAGNAGEAFSLVSVDEKHLLHKIER
VTGSQIERVLVEGFHPDPSIKAEASGKRPRSGGRGRGFGSSGRRGASGGREGRTFRKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaaggctttgaacctgaacccccgtatcatgcgtgccgtcgaagaggagggc
tacaccgaacctacaccgatccaggctgaagctattccggccattctggatggggaagat
cttctcgctgccgctcagaccggtaccggaaaaacagccgcttttacactcccgatgctg
cagaagttctccgacaagaaaggggagggcagacgctatgtccgcgcacttgtgctcaca
cccaccagagagctggccgcgcaggtgcaccagagcgtgcgtacatacgggaagtatcta
aagctcaagagcgcggaagtttacggcggtgtctcactgcatccgcagacccgtgcgctg
cgcaacggtgtcgatattctcgtcgccacccccggccgcctgctcgaccatctcaaccag
cgcaacgtcgatctgagcagagttgagatactcgtgctggatgaggcggacagaatgctc
gatatgggctttataaacgatataaaaaagatcatcgcggagcttccccacttcaggcag
aatcttctcttttcggcaaccttctcagaggagataaagcgcctcagcaaaacgattctg
aaagagccccgtatgataaaagtggcggctgacaacaccaccgcagaccgtataaaacag
accatccacccggtagacagggttaaaaaggccgatctgctgagccatcttatcggaacc
aacaactggaaacaggtacttgtatttacccgcacaaagcatggagccgacaagctctcg
agacgccttgcgcaagacggcctgcccagtacctccattcacggaaacaagacgcaggcg
gcgcgcatgaaggcgcttaaagctttcaaagatggacgtgtccgcgttcttgtcgctacg
gatgtggctgcacgaggtatcgatatcgacagactgggccaggtcgtcaacttcgacctg
cccgaagtggccgaagactatgtgcaccgcataggcagaacgggtcgcgccggcaacgcc
ggtgaagccttttccctggtctccgtagacgagaagcacctgctccataaaatcgaaaga
gtgactggttcgcagatagagagggttctggtagagggttttcatccggacccgtccatc
aaggccgaagcttccgggaagcgcccgagaagcggcggcagaggcaggggcttcggctct
tcgggccgcagaggagcctccggcggccgtgaaggcagaactttccgcaaaagatcctga
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