Hymenobacter psoromatis: A0257_01845
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Entry
A0257_01845 CDS
T04376
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hyp
Hymenobacter psoromatis
Pathway
hyp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A0257_01845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyp03400
]
A0257_01845
Enzymes [BR:
hyp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A0257_01845
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A0257_01845
DNA repair and recombination proteins [BR:
hyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A0257_01845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AMR25962
LinkDB
All DBs
Position
complement(401549..402373)
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETYRRFIDEVAVGQTITGLEVRDAHVLAVPEDELRAALLGRTITGTGRLGKNC
FLELDNGRLLVLHFGMTGDIGAYRDAPDAPRFTRVAWQLSDSGLNLAFIDPRKFGRIRLA
DSAEAYQKAKKLGPDALQITAAELHQKLSRRKVFVKPLLLDQSLTAGLGNWIVDEVLFQA
KIHPERLGNSLSEKETTALHAAIQLVLTTAIQHEANYRLFPKSFLIHAREWDESATPGSD
AHTFCPRHPKVKIEKFYVGGRATYSCPKCQPTPA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaattacccgaagtcgaaacctaccgccgttttatagacgaagtggccgtgggc
cagacgattaccggcctcgaagtgcgcgacgcgcacgtgctggccgtgcccgaagacgag
ctgcgcgccgccctgctgggccgcaccattactggcaccggccgactgggcaaaaactgc
ttcttggagttggataatggccgcctgctggtattgcacttcggcatgaccggcgacatc
ggtgcctaccgcgacgcgcccgatgccccgcgcttcacccgcgtggcttggcagctcagc
gattcgggcctgaatttggcgtttatcgacccgcgcaagtttggccgcatccggctggcc
gatagcgccgaagcgtaccagaaagccaagaagctcggccccgacgcgctgcaaataact
gccgccgagctgcaccagaaactcagccgccgcaaggtattcgtgaagccgctgctgctc
gaccagagcctcaccgccggcctcggtaactggattgtggacgaggttttatttcaggcc
aaaattcaccccgagcgtttaggtaattctttgtctgagaaggaaaccacggcgttgcac
gccgccattcaattagtgttgacgacggcgattcagcacgaggcgaattaccggcttttc
ccgaaatcgtttctcattcacgcccgcgagtgggacgagtcggctacccccggcagcgac
gcgcataccttttgcccgcgtcacccgaaggtgaaaatcgagaaattttacgtgggcggc
cgggccacgtatagctgcccgaagtgccagcccacgccggcctaa
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